Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AL589765.3-201ENST00000446084 462 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AL162151.2-201ENST00000448875 158 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AL591623.2-201ENST00000449978 222 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AP000942.1-201ENST00000463969 747 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 RN7SL542P-201ENST00000467147 294 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC022034.3-201ENST00000471393 478 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC017037.1-201ENST00000508460 471 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 UBTFL9-201ENST00000534504 1148 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 MIR5684-201ENST00000585074 65 ntBASIC5.02□□□□□ -1.61
RFX7Q2KHR2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RFX7Q2KHR2 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 RNA5SP52-201ENST00000362448 134 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 RNU4-44P-201ENST00000363050 141 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 MT-RNR1-201ENST00000389680 954 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 CYP4F29P-201ENST00000420685 446 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AF213884.1-201ENST00000488102 463 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC025554.1-201ENST00000505641 188 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 AC245389.1-201ENST00000605141 529 ntBASIC5.01□□□□□ -1.61
RFX7Q2KHR2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX7Q2KHR2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RFX7Q2KHR2 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5□□□□□ -1.61
RFX7Q2KHR2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5□□□□□ -1.61
RFX7Q2KHR2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX7Q2KHR2 CYCSP19-201ENST00000411715 316 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 CYCSP10-201ENST00000417973 294 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 AL451062.2-201ENST00000427515 271 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5□□□□□ -1.61
RFX7Q2KHR2 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5□□□□□ -1.61
RFX7Q2KHR2 RPL23AP2-201ENST00000471227 466 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 OR7E10P-201ENST00000526420 991 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5□□□□□ -1.61
RFX7Q2KHR2 AC112484.5-201ENST00000624189 228 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5□□□□□ -1.61
RFX7Q2KHR2 OR8B1P-202ENST00000641132 1178 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 AC138627.1-204ENST00000641894 765 ntBASIC5□□□□□ -1.61
RFX7Q2KHR2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5□□□□□ -1.61
RFX7Q2KHR2 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFX7Q2KHR2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC011266.1-201ENST00000624119 3569 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 RNA5SP513-201ENST00000364648 118 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 RNA5SP171-201ENST00000391071 115 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 RNU6-628P-201ENST00000410675 107 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 LINC01881-201ENST00000416103 412 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC006011.1-201ENST00000442758 349 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 SEPT14P1-201ENST00000458703 648 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC053481.4-201ENST00000583164 216 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 MIR6875-201ENST00000617506 72 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AC034229.5-201ENST00000624258 185 ntBASIC4.99□□□□□ -1.61
RFX7Q2KHR2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX7Q2KHR2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RFX7Q2KHR2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 126.5 ms