Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX4Q06945 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX4Q06945 RNU6-723P-201ENST00000383973 107 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 AC025750.1-201ENST00000399891 379 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 SNORA11C-201ENST00000408532 129 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 RNU4-55P-201ENST00000410731 137 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 AC093084.1-201ENST00000424233 687 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 AC126120.1-201ENST00000431082 470 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AL731534.1-201ENST00000434711 269 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 AP000281.1-201ENST00000444036 316 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 AL445665.1-202ENST00000452436 324 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 RAD23BP3-201ENST00000454157 1152 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 NXT1P1-201ENST00000458481 316 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 AC138866.2-201ENST00000508650 584 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 MTCO1P30-201ENST00000515244 580 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 OR5AP1P-201ENST00000529730 940 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AP001804.2-201ENST00000533932 910 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 ARL2BPP2-201ENST00000550907 489 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.36□□□□□ -1.39
SOX4Q06945 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 AL161729.3-201ENST00000603533 673 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AC091488.1-201ENST00000604239 660 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 RNU6-88P-201ENST00000606801 100 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.36□□□□□ -1.39
SOX4Q06945 MIR3662-201ENST00000637030 95 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 OR13C1P-202ENST00000641378 2919 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
SOX4Q06945 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX4Q06945 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
SOX4Q06945 AP000547.3-204ENST00000588548 2523 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SOX4Q06945 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SOX4Q06945 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.36□□□□□ -1.39
SOX4Q06945 AC010168.2-201ENST00000562691 5428 ntBASIC6.36□□□□□ -1.39
SOX4Q06945 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 AL021877.2-201ENST00000624442 10684 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SOX4Q06945 Y_RNA.142-201ENST00000363491 102 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 Y_RNA.326-201ENST00000365176 113 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SOX4Q06945 RNA5SP105-201ENST00000391123 113 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 RPL23AP29-201ENST00000397284 453 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 RPS3AP36-201ENST00000398190 775 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 MYL6P5-201ENST00000412707 459 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 HMGB1P11-201ENST00000413899 637 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 HMGA1P8-201ENST00000414130 321 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC127526.2-201ENST00000426436 775 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.35□□□□□ -1.39
SOX4Q06945 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.35□□□□□ -1.39
SOX4Q06945 AL162739.1-201ENST00000450606 307 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 RPL15P21-201ENST00000495592 567 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC021678.1-201ENST00000505195 936 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 SNORA70.20-201ENST00000516848 126 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 ARL2BPP5-201ENST00000523141 481 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.35□□□□□ -1.39
SOX4Q06945 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 HMGN2P36-201ENST00000529541 409 ntBASIC6.35□□□□□ -1.39
SOX4Q06945 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC6.35□□□□□ -1.39
SOX4Q06945 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms