Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNA1P78396 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.99□□□□□ -1.61
CCNA1P78396 OR5BC1P-201ENST00000529327 739 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC087888.1-201ENST00000550884 1254 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.99□□□□□ -1.61
CCNA1P78396 MIR3936-201ENST00000584304 110 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNA1P78396 RNU4-89P-201ENST00000607443 133 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC116447.1-201ENST00000613153 453 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 BMS1P21-201ENST00000634565 365 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCNA1P78396 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
CCNA1P78396 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCNA1P78396 AL133243.3-201ENST00000617415 3004 ntBASIC4.99□□□□□ -1.61
CCNA1P78396 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNA1P78396 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 CASC19-204ENST00000641001 2055 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCNA1P78396 RNU1-14P-201ENST00000362759 152 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 RNU6-225P-201ENST00000384613 103 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 MIR554-201ENST00000384874 96 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AL034403.1-201ENST00000399414 885 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AL590806.1-201ENST00000415818 853 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNA1P78396 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNA1P78396 MFSD13B-201ENST00000420133 1290 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CCNA1P78396 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 COX6B1P7-201ENST00000430845 235 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNA1P78396 RPL21P89-201ENST00000444021 467 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AC105233.3-201ENST00000531125 744 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 NPM1P35-201ENST00000533043 868 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 GLRXP2-201ENST00000555594 321 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNA1P78396 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNA1P78396 MIR4429-201ENST00000580105 73 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 RN7SL600P-201ENST00000581811 299 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.98□□□□□ -1.61
CCNA1P78396 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.98□□□□□ -1.61
CCNA1P78396 AC010615.3-201ENST00000597319 394 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 MIR6867-201ENST00000610636 67 ntBASIC4.98□□□□□ -1.61
CCNA1P78396 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.98□□□□□ -1.61
CCNA1P78396 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCNA1P78396 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC000123.3-201ENST00000624029 4975 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AC000374.1-201ENST00000434698 1745 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCNA1P78396 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
CCNA1P78396 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 AL389915.1-201ENST00000422463 466 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 EIF1P3-201ENST00000423841 334 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AL157831.1-201ENST00000426134 473 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 RPL7P2-201ENST00000427639 268 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AC092447.2-201ENST00000435487 669 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AC092013.1-201ENST00000438795 332 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AL162151.2-201ENST00000448875 158 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC079804.1-201ENST00000461922 436 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 RN7SL132P-201ENST00000478131 296 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC099522.1-202ENST00000514718 367 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AC023632.4-201ENST00000517783 191 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.97□□□□□ -1.61
CCNA1P78396 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.97□□□□□ -1.61
CCNA1P78396 AC091905.2-201ENST00000623143 306 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 AL356863.1-201ENST00000623378 1080 ntBASIC4.97□□□□□ -1.61
CCNA1P78396 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CCNA1P78396 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.97□□□□□ -1.61
CCNA1P78396 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.97□□□□□ -1.61
CCNA1P78396 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CCNA1P78396 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCNA1P78396 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CCNA1P78396 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
CCNA1P78396 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.96□□□□□ -1.62
CCNA1P78396 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCNA1P78396 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCNA1P78396 SNORA62.3-201ENST00000365110 153 ntBASIC4.96□□□□□ -1.62
CCNA1P78396 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.96□□□□□ -1.62
CCNA1P78396 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CCNA1P78396 RN7SKP235-201ENST00000410662 305 ntBASIC4.96□□□□□ -1.62
CCNA1P78396 RN7SKP182-201ENST00000410772 298 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms