Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC091057.2-201ENST00000602594 792 ntBASIC3.93□□□□□ -1.78
LMO4P61968 AC069304.3-201ENST00000603938 1084 ntBASIC3.93□□□□□ -1.78
LMO4P61968 AC002487.1-201ENST00000604565 994 ntBASIC3.93□□□□□ -1.78
LMO4P61968 AC245008.1-201ENST00000608123 476 ntBASIC3.93□□□□□ -1.78
LMO4P61968 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.93□□□□□ -1.78
LMO4P61968 AC078880.5-201ENST00000617845 421 ntBASIC3.93□□□□□ -1.78
LMO4P61968 AP003497.2-201ENST00000624220 967 ntBASIC3.93□□□□□ -1.78
LMO4P61968 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
LMO4P61968 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
LMO4P61968 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.93□□□□□ -1.78
LMO4P61968 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.93□□□□□ -1.78
LMO4P61968 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.93□□□□□ -1.78
LMO4P61968 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.93□□□□□ -1.78
LMO4P61968 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LMO4P61968 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LMO4P61968 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LMO4P61968 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 MIR129-1-201ENST00000384972 72 ntBASIC3.92□□□□□ -1.78
LMO4P61968 RNU6-244P-201ENST00000391028 104 ntBASIC3.92□□□□□ -1.78
LMO4P61968 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 FO393414.1-201ENST00000428697 1184 ntBASIC3.92□□□□□ -1.78
LMO4P61968 VN1R108P-201ENST00000431580 830 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC091390.1-201ENST00000433904 331 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC092447.2-201ENST00000435487 669 ntBASIC3.92□□□□□ -1.78
LMO4P61968 MTCO1P53-201ENST00000441633 699 ntBASIC3.92□□□□□ -1.78
LMO4P61968 MTCYBP21-201ENST00000443300 1113 ntBASIC3.92□□□□□ -1.78
LMO4P61968 RPL10P17-201ENST00000453852 316 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC079168.2-201ENST00000453977 416 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AL356981.1-201ENST00000454879 684 ntBASIC3.92□□□□□ -1.78
LMO4P61968 VN1R40P-201ENST00000455196 941 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC021660.1-201ENST00000465006 554 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 NPM1P29-201ENST00000483112 803 ntBASIC3.92□□□□□ -1.78
LMO4P61968 MTCO3P35-201ENST00000485582 781 ntBASIC3.92□□□□□ -1.78
LMO4P61968 MTND4LP2-201ENST00000502312 285 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC008427.1-201ENST00000503102 655 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 AC108471.1-201ENST00000513977 287 ntBASIC3.92□□□□□ -1.78
LMO4P61968 RNU6-276P-201ENST00000516114 96 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC010476.1-201ENST00000519111 851 ntBASIC3.92□□□□□ -1.78
LMO4P61968 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.92□□□□□ -1.78
LMO4P61968 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC105129.1-201ENST00000560250 297 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 SS18L2P2-201ENST00000583960 235 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC110760.3-201ENST00000598794 467 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC124856.1-201ENST00000600819 896 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC113368.1-201ENST00000603736 382 ntBASIC3.92□□□□□ -1.78
LMO4P61968 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.92□□□□□ -1.78
LMO4P61968 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 AL512506.2-201ENST00000624472 458 ntBASIC3.92□□□□□ -1.78
LMO4P61968 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
LMO4P61968 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC3.92□□□□□ -1.78
LMO4P61968 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LMO4P61968 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.92□□□□□ -1.78
LMO4P61968 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms