Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GFRA1P56159 NFIB-202ENST00000380924 840 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 Y_RNA.390-201ENST00000383932 102 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC004386.1-201ENST00000393214 761 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RPS3AP36-201ENST00000398190 775 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 DSTNP4-201ENST00000399472 474 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AL590002.1-201ENST00000406554 418 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 Y_RNA.608-201ENST00000410647 95 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RNU4-64P-201ENST00000410795 131 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AL133384.1-201ENST00000412744 351 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC245096.1-201ENST00000413104 546 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC004690.1-201ENST00000418216 328 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RPS7P8-201ENST00000418311 581 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 AC009965.2-201ENST00000425328 970 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 ELOCP10-201ENST00000440624 327 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 PGBD4P3-201ENST00000440731 581 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RPL23AP16-201ENST00000441715 421 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 OR7E125P-201ENST00000443450 846 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC005297.1-201ENST00000444765 862 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 HMGN1P2-201ENST00000445197 310 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 AC026410.2-201ENST00000460281 156 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 NDUFA5P5-201ENST00000468361 342 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RN7SL165P-201ENST00000477476 291 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC024589.1-201ENST00000512207 263 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.53□□□□□ -1.52
GFRA1P56159 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC5.53□□□□□ -1.52
GFRA1P56159 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 RPL21P5-201ENST00000554662 472 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AL121579.1-201ENST00000555129 305 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC018552.1-201ENST00000562099 811 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AL391840.1-201ENST00000571144 367 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 MIR4301-201ENST00000577203 66 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.53□□□□□ -1.52
GFRA1P56159 MAGOH2P-202ENST00000584384 429 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 ELOCP34-201ENST00000604436 327 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AL359999.1-201ENST00000604513 294 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 LARP7P1-201ENST00000605576 316 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC141002.1-201ENST00000607025 279 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC136475.10-201ENST00000620253 385 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC024884.1-201ENST00000620583 399 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 MIR6863-201ENST00000636112 90 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 MIR3688-2-201ENST00000636963 87 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.53□□□□□ -1.52
GFRA1P56159 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 AC073544.1-201ENST00000600110 1595 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 AC008627.1-201ENST00000517511 1704 ntBASIC5.53□□□□□ -1.52
GFRA1P56159 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
GFRA1P56159 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
GFRA1P56159 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 AC097461.1-201ENST00000568928 2821 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 AC092724.1-201ENST00000624623 3397 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 AC024587.1-201ENST00000505925 2157 ntBASIC5.52□□□□□ -1.53
GFRA1P56159 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
GFRA1P56159 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
GFRA1P56159 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
GFRA1P56159 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
GFRA1P56159 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms