Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 AL157884.3-201ENST00000448273 1184 ntBASIC4.44□□□□□ -1.7
CDH6P55285 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH6P55285 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 AC117525.1-201ENST00000515228 503 ntBASIC4.44□□□□□ -1.7
CDH6P55285 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.44□□□□□ -1.7
CDH6P55285 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDH6P55285 AC027176.2-201ENST00000559166 746 ntBASIC4.44□□□□□ -1.7
CDH6P55285 AC090515.3-201ENST00000560431 315 ntBASIC4.44□□□□□ -1.7
CDH6P55285 ADAM3B-201ENST00000569937 840 ntBASIC4.44□□□□□ -1.7
CDH6P55285 AL356218.2-201ENST00000605264 187 ntBASIC4.44□□□□□ -1.7
CDH6P55285 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.44□□□□□ -1.7
CDH6P55285 AC090948.2-201ENST00000607363 564 ntBASIC4.44□□□□□ -1.7
CDH6P55285 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDH6P55285 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDH6P55285 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.44□□□□□ -1.7
CDH6P55285 AC009313.2-201ENST00000417893 1941 ntBASIC4.44□□□□□ -1.7
CDH6P55285 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH6P55285 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDH6P55285 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH6P55285 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
CDH6P55285 EIF2AP4-201ENST00000424793 1781 ntBASIC4.43□□□□□ -1.7
CDH6P55285 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH6P55285 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDH6P55285 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDH6P55285 RNU6-225P-201ENST00000384613 103 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AL121834.1-202ENST00000404494 277 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH6P55285 EIF4EP1-201ENST00000422311 642 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC009480.2-201ENST00000422916 432 ntBASIC4.43□□□□□ -1.7
CDH6P55285 RPL12P34-201ENST00000424532 479 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AL353597.2-202ENST00000434901 373 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AL512326.1-201ENST00000443050 721 ntBASIC4.43□□□□□ -1.7
CDH6P55285 CYCSP42-201ENST00000450823 238 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC133473.1-201ENST00000455173 299 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC013356.1-201ENST00000489027 564 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.43□□□□□ -1.7
CDH6P55285 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.43□□□□□ -1.7
CDH6P55285 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH6P55285 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH6P55285 AC068446.3-201ENST00000555285 382 ntBASIC4.43□□□□□ -1.7
CDH6P55285 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH6P55285 AC068790.4-201ENST00000602474 263 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.43□□□□□ -1.7
CDH6P55285 AL445363.3-201ENST00000623080 671 ntBASIC4.43□□□□□ -1.7
CDH6P55285 AP003497.2-201ENST00000624220 967 ntBASIC4.43□□□□□ -1.7
CDH6P55285 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH6P55285 AC008013.2-202ENST00000637965 364 ntBASIC4.43□□□□□ -1.7
CDH6P55285 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.43□□□□□ -1.7
CDH6P55285 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.43□□□□□ -1.7
CDH6P55285 AC139713.2-214ENST00000642059 1811 ntBASIC4.43□□□□□ -1.7
CDH6P55285 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDH6P55285 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDH6P55285 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
CDH6P55285 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 SPATA2P1-201ENST00000431223 2055 ntBASIC4.42□□□□□ -1.7
CDH6P55285 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 IGKV7-3-201ENST00000357453 298 ntBASIC4.42□□□□□ -1.7
CDH6P55285 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
CDH6P55285 RNU6-386P-201ENST00000362650 107 ntBASIC4.42□□□□□ -1.7
CDH6P55285 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDH6P55285 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 NRBF2P2-201ENST00000413087 861 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH6P55285 MFSD13B-201ENST00000420133 1290 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AL157831.1-201ENST00000426134 473 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AL158073.1-201ENST00000426848 1104 ntBASIC4.42□□□□□ -1.7
CDH6P55285 RPS29P17-201ENST00000430795 166 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH6P55285 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH6P55285 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH6P55285 RPL23AP81-201ENST00000455252 467 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AC021205.1-201ENST00000468797 348 ntBASIC4.42□□□□□ -1.7
CDH6P55285 RN7SL459P-201ENST00000481078 302 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 AC006499.6-201ENST00000511169 607 ntBASIC4.42□□□□□ -1.7
CDH6P55285 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 AC134698.5-201ENST00000519444 336 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH6P55285 AC084033.1-201ENST00000550830 633 ntBASIC4.42□□□□□ -1.7
CDH6P55285 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 GLRXP2-201ENST00000555594 321 ntBASIC4.42□□□□□ -1.7
CDH6P55285 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.42□□□□□ -1.7
CDH6P55285 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH6P55285 BMS1P7-201ENST00000602440 1052 ntBASIC4.42□□□□□ -1.7
CDH6P55285 AC008745.1-201ENST00000604064 271 ntBASIC4.42□□□□□ -1.7
CDH6P55285 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH6P55285 AC145207.9-201ENST00000623802 325 ntBASIC4.42□□□□□ -1.7
CDH6P55285 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH6P55285 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms