Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VCPP55072 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VCPP55072 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 SCN1A-220ENST00000641603 12506 ntBASIC4.87□□□□□ -1.63
VCPP55072 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 AC015813.6-201ENST00000624409 5808 ntBASIC4.87□□□□□ -1.63
VCPP55072 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 MIR554-201ENST00000384874 96 ntBASIC4.87□□□□□ -1.63
VCPP55072 MT-TP-201ENST00000387461 68 ntBASIC4.87□□□□□ -1.63
VCPP55072 AL034403.1-201ENST00000399414 885 ntBASIC4.87□□□□□ -1.63
VCPP55072 MIR921-201ENST00000401133 56 ntBASIC4.87□□□□□ -1.63
VCPP55072 RN7SKP202-201ENST00000410439 330 ntBASIC4.87□□□□□ -1.63
VCPP55072 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.87□□□□□ -1.63
VCPP55072 RPL7AP25-201ENST00000423357 805 ntBASIC4.87□□□□□ -1.63
VCPP55072 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.87□□□□□ -1.63
VCPP55072 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.87□□□□□ -1.63
VCPP55072 RN7SL132P-201ENST00000478131 296 ntBASIC4.87□□□□□ -1.63
VCPP55072 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.87□□□□□ -1.63
VCPP55072 AC015795.1-201ENST00000513669 327 ntBASIC4.87□□□□□ -1.63
VCPP55072 TCP11X3P-202ENST00000514289 1254 ntBASIC4.87□□□□□ -1.63
VCPP55072 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.87□□□□□ -1.63
VCPP55072 MTND4LP31-201ENST00000514859 294 ntBASIC4.87□□□□□ -1.63
VCPP55072 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 NPM1P35-201ENST00000533043 868 ntBASIC4.87□□□□□ -1.63
VCPP55072 RN7SL652P-201ENST00000577769 300 ntBASIC4.87□□□□□ -1.63
VCPP55072 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.87□□□□□ -1.63
VCPP55072 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.87□□□□□ -1.63
VCPP55072 AC115286.1-201ENST00000604298 434 ntBASIC4.87□□□□□ -1.63
VCPP55072 AL591034.3-201ENST00000605511 685 ntBASIC4.87□□□□□ -1.63
VCPP55072 AC012409.3-201ENST00000611343 981 ntBASIC4.87□□□□□ -1.63
VCPP55072 AC140113.4-201ENST00000622087 222 ntBASIC4.87□□□□□ -1.63
VCPP55072 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.87□□□□□ -1.63
VCPP55072 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 AC139713.2-215ENST00000641428 5037 ntBASIC4.87□□□□□ -1.63
VCPP55072 AL136164.3-201ENST00000624429 3978 ntBASIC4.87□□□□□ -1.63
VCPP55072 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VCPP55072 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VCPP55072 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.87□□□□□ -1.63
VCPP55072 MAPK10-304ENST00000641341 3984 ntBASIC4.87□□□□□ -1.63
VCPP55072 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VCPP55072 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.87□□□□□ -1.63
VCPP55072 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.86□□□□□ -1.63
VCPP55072 AC011155.1-201ENST00000316512 456 ntBASIC4.86□□□□□ -1.63
VCPP55072 OR56B2P-201ENST00000317102 954 ntBASIC4.86□□□□□ -1.63
VCPP55072 RNU6-386P-201ENST00000362650 107 ntBASIC4.86□□□□□ -1.63
VCPP55072 OR51B3P-201ENST00000412287 913 ntBASIC4.86□□□□□ -1.63
VCPP55072 AC140479.3-201ENST00000418944 1126 ntBASIC4.86□□□□□ -1.63
VCPP55072 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VCPP55072 AL132765.1-201ENST00000434165 553 ntBASIC4.86□□□□□ -1.63
VCPP55072 PPIAP13-201ENST00000434706 478 ntBASIC4.86□□□□□ -1.63
VCPP55072 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.86□□□□□ -1.63
VCPP55072 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.86□□□□□ -1.63
VCPP55072 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.86□□□□□ -1.63
VCPP55072 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.86□□□□□ -1.63
VCPP55072 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.86□□□□□ -1.63
VCPP55072 CLIC4P1-201ENST00000453177 535 ntBASIC4.86□□□□□ -1.63
VCPP55072 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.86□□□□□ -1.63
VCPP55072 AC025164.1-201ENST00000496249 478 ntBASIC4.86□□□□□ -1.63
VCPP55072 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.86□□□□□ -1.63
VCPP55072 AC087888.1-201ENST00000550884 1254 ntBASIC4.86□□□□□ -1.63
VCPP55072 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.86□□□□□ -1.63
VCPP55072 FAM60CP-201ENST00000591086 664 ntBASIC4.86□□□□□ -1.63
VCPP55072 IPO5P1-202ENST00000600039 287 ntBASIC4.86□□□□□ -1.63
VCPP55072 AC034236.3-201ENST00000605999 461 ntBASIC4.86□□□□□ -1.63
VCPP55072 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.86□□□□□ -1.63
VCPP55072 AL023881.1-201ENST00000621088 301 ntBASIC4.86□□□□□ -1.63
VCPP55072 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.86□□□□□ -1.63
VCPP55072 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VCPP55072 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
VCPP55072 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.86□□□□□ -1.63
VCPP55072 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VCPP55072 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
VCPP55072 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 SNORD46.1-201ENST00000364139 104 ntBASIC4.85□□□□□ -1.63
VCPP55072 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VCPP55072 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VCPP55072 RPL23AP59-201ENST00000399415 461 ntBASIC4.85□□□□□ -1.63
VCPP55072 CYCSP10-201ENST00000417973 294 ntBASIC4.85□□□□□ -1.63
VCPP55072 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VCPP55072 Z85994.2-201ENST00000434327 452 ntBASIC4.85□□□□□ -1.63
VCPP55072 AL353597.2-202ENST00000434901 373 ntBASIC4.85□□□□□ -1.63
VCPP55072 AC093716.1-201ENST00000435923 377 ntBASIC4.85□□□□□ -1.63
VCPP55072 AL354710.1-201ENST00000453641 246 ntBASIC4.85□□□□□ -1.63
VCPP55072 RPL21P126-201ENST00000470049 478 ntBASIC4.85□□□□□ -1.63
VCPP55072 DEFB109F-201ENST00000491870 277 ntBASIC4.85□□□□□ -1.63
VCPP55072 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.85□□□□□ -1.63
VCPP55072 AK4P6-201ENST00000505168 528 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms