Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCNKAP51800 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.76□□□□□ -1.65
CLCNKAP51800 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLCNKAP51800 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.76□□□□□ -1.65
CLCNKAP51800 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLCNKAP51800 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCNKAP51800 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CLCNKAP51800 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCNKAP51800 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CLCNKAP51800 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCNKAP51800 MIR142-201ENST00000384835 87 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 RPL37P18-201ENST00000411602 243 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AL590139.1-201ENST00000416267 400 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 MTCO3P4-201ENST00000419236 787 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 LINC00993-201ENST00000420453 540 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.75□□□□□ -1.65
CLCNKAP51800 FO393419.3-201ENST00000428741 282 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AL359265.2-201ENST00000434367 631 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC000041.1-201ENST00000439655 175 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 Z80107.2-201ENST00000445127 392 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AL356981.1-201ENST00000454879 684 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 CCDC75P1-201ENST00000469247 791 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 OR7H2P-201ENST00000513483 306 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AC063949.1-201ENST00000552900 865 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AL049830.4-201ENST00000555149 351 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.75□□□□□ -1.65
CLCNKAP51800 MTATP6P24-201ENST00000576835 677 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 MIR4789-201ENST00000577469 82 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 SNORA74C-1-201ENST00000580726 201 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC022726.1-201ENST00000587475 207 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AL157392.4-201ENST00000609756 345 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 MIR6780A-201ENST00000615089 68 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC022106.2-201ENST00000620114 757 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CLCNKAP51800 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.75□□□□□ -1.65
CLCNKAP51800 AC017007.4-201ENST00000503353 1352 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CLCNKAP51800 AC012618.3-205ENST00000637896 1496 ntBASIC4.75□□□□□ -1.65
CLCNKAP51800 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCNKAP51800 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CLCNKAP51800 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCNKAP51800 AL132640.2-201ENST00000559968 1698 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AC009643.2-201ENST00000603543 1448 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
CLCNKAP51800 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCNKAP51800 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC017079.1-201ENST00000333650 415 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 RNU5B-1-201ENST00000363286 116 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 U3.30-201ENST00000391308 210 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CLCNKAP51800 RNU6-603P-201ENST00000411403 107 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AC073136.2-201ENST00000417282 849 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC004074.1-201ENST00000421810 1063 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 OR2B7P-201ENST00000429302 934 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 ELOCP10-201ENST00000440624 327 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 MTCO1P53-201ENST00000441633 699 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 GTF3AP5-201ENST00000442645 697 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCNKAP51800 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.74□□□□□ -1.65
CLCNKAP51800 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 NIP7P2-201ENST00000485801 544 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 RN7SL558P-201ENST00000497468 299 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 HPRT1P1-201ENST00000509498 657 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AP001207.2-201ENST00000519490 539 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AP001880.2-201ENST00000538233 448 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.74□□□□□ -1.65
CLCNKAP51800 AC068714.1-201ENST00000559623 800 ntBASIC4.74□□□□□ -1.65
CLCNKAP51800 RN7SL802P-201ENST00000577858 299 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms