Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 SULT1C2P2-201ENST00000562517 294 ntBASIC4.61□□□□□ -1.67
CASP4P49662 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 CYP4A43P-201ENST00000568156 121 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.61□□□□□ -1.67
CASP4P49662 MIR3138-201ENST00000585238 82 ntBASIC4.61□□□□□ -1.67
CASP4P49662 MIR432-201ENST00000606207 94 ntBASIC4.61□□□□□ -1.67
CASP4P49662 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AL133370.2-201ENST00000619934 439 ntBASIC4.61□□□□□ -1.67
CASP4P49662 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.61□□□□□ -1.67
CASP4P49662 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.61□□□□□ -1.67
CASP4P49662 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.61□□□□□ -1.67
CASP4P49662 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.61□□□□□ -1.67
CASP4P49662 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CASP4P49662 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.6□□□□□ -1.67
CASP4P49662 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CASP4P49662 RNU1-108P-201ENST00000362556 161 ntBASIC4.6□□□□□ -1.67
CASP4P49662 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.6□□□□□ -1.67
CASP4P49662 MIR141-201ENST00000384975 95 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AL161909.1-201ENST00000397390 712 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AC016397.1-201ENST00000412463 242 ntBASIC4.6□□□□□ -1.67
CASP4P49662 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.6□□□□□ -1.67
CASP4P49662 P2RY10P2-201ENST00000416730 913 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AL590609.2-201ENST00000421430 368 ntBASIC4.6□□□□□ -1.67
CASP4P49662 RPL23AP4-201ENST00000427757 463 ntBASIC4.6□□□□□ -1.67
CASP4P49662 DYNLL1P7-201ENST00000429273 258 ntBASIC4.6□□□□□ -1.67
CASP4P49662 LARP7P4-201ENST00000481075 878 ntBASIC4.6□□□□□ -1.67
CASP4P49662 ATG10-AS1-201ENST00000504846 648 ntBASIC4.6□□□□□ -1.67
CASP4P49662 NPM1P6-201ENST00000521088 871 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.6□□□□□ -1.67
CASP4P49662 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 PDCD5P1-201ENST00000543528 309 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.6□□□□□ -1.67
CASP4P49662 TVP23BP1-201ENST00000557500 617 ntBASIC4.6□□□□□ -1.67
CASP4P49662 KPNA2P3-201ENST00000584190 848 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AL161729.3-201ENST00000603533 673 ntBASIC4.6□□□□□ -1.67
CASP4P49662 ARF4P1-201ENST00000605447 541 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AL023583.1-201ENST00000607518 1143 ntBASIC4.6□□□□□ -1.67
CASP4P49662 FAM27D1-201ENST00000612308 341 ntBASIC4.6□□□□□ -1.67
CASP4P49662 AC015908.5-201ENST00000623289 343 ntBASIC4.6□□□□□ -1.67
CASP4P49662 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CASP4P49662 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CASP4P49662 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.6□□□□□ -1.67
CASP4P49662 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CASP4P49662 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CASP4P49662 AL034403.1-201ENST00000399414 885 ntBASIC4.59□□□□□ -1.67
CASP4P49662 RPL23AP26-201ENST00000412728 464 ntBASIC4.59□□□□□ -1.67
CASP4P49662 AC009302.1-201ENST00000417147 390 ntBASIC4.59□□□□□ -1.67
CASP4P49662 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 H2AFZP6-201ENST00000444403 394 ntBASIC4.59□□□□□ -1.67
CASP4P49662 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 RN7SL481P-201ENST00000477764 299 ntBASIC4.59□□□□□ -1.67
CASP4P49662 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 AF213884.1-201ENST00000488102 463 ntBASIC4.59□□□□□ -1.67
CASP4P49662 AC108475.1-201ENST00000507880 950 ntBASIC4.59□□□□□ -1.67
CASP4P49662 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 AL592156.1-201ENST00000508758 304 ntBASIC4.59□□□□□ -1.67
CASP4P49662 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP4P49662 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP4P49662 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 CYCSP29-201ENST00000533731 318 ntBASIC4.59□□□□□ -1.67
CASP4P49662 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.59□□□□□ -1.67
CASP4P49662 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP4P49662 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 MIR378J-201ENST00000611988 109 ntBASIC4.59□□□□□ -1.67
CASP4P49662 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CASP4P49662 LINC00901.1-201ENST00000617252 152 ntBASIC4.59□□□□□ -1.67
CASP4P49662 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.59□□□□□ -1.67
CASP4P49662 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CASP4P49662 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.59□□□□□ -1.67
CASP4P49662 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.59□□□□□ -1.67
CASP4P49662 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
CASP4P49662 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.68
CASP4P49662 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
CASP4P49662 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP4P49662 AC007342.7-201ENST00000624610 2337 ntBASIC4.58□□□□□ -1.68
CASP4P49662 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP4P49662 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CASP4P49662 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CASP4P49662 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms