Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC020915.5-201ENST00000596836 964 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC008536.1-201ENST00000602872 669 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 AL138721.1-201ENST00000616756 179 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC119674.1-212ENST00000641155 993 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC073429.2-201ENST00000569694 1444 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
CSNK1A1P48729 AC012020.1-201ENST00000624541 1728 ntBASIC3.92□□□□□ -1.78
CSNK1A1P48729 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CSNK1A1P48729 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 Z98755.1-201ENST00000407015 1384 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 RNU4-23P-201ENST00000362839 140 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 RNU6-670P-201ENST00000364312 104 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 MIR129-1-201ENST00000384972 72 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 MIR92A2-201ENST00000385299 75 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 RNA5SP332-201ENST00000391063 115 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 ZNF736P10Y-201ENST00000403990 1110 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 RPEP3-201ENST00000425462 676 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC011753.3-201ENST00000443436 406 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 NDUFS5P3-201ENST00000450668 321 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 PSMC1P13-201ENST00000458195 985 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC053481.1-201ENST00000467217 306 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC093720.1-201ENST00000505681 714 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 IGLVIV-65-201ENST00000517313 360 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 DEFB109D-201ENST00000529497 240 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 OR5AN2P-201ENST00000534535 896 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC137768.1-201ENST00000549998 553 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL049874.4-201ENST00000557593 255 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC068020.1-201ENST00000594215 661 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 RPL12P25-202ENST00000598100 674 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC115286.1-201ENST00000604298 434 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 BNIP3P7-201ENST00000605641 516 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC012409.3-201ENST00000611343 981 ntBASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
CSNK1A1P48729 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CSNK1A1P48729 AL132640.2-201ENST00000559968 1698 ntBASIC3.9□□□□□ -1.78
CSNK1A1P48729 MTND4P26-201ENST00000415971 1359 ntBASIC3.9□□□□□ -1.78
CSNK1A1P48729 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.9□□□□□ -1.78
CSNK1A1P48729 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
CSNK1A1P48729 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CSNK1A1P48729 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
CSNK1A1P48729 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1A1P48729 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CSNK1A1P48729 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CSNK1A1P48729 MIR448-201ENST00000362131 111 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 RNU6-386P-201ENST00000362650 107 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1A1P48729 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CSNK1A1P48729 MIR3065-201ENST00000390137 79 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 RN7SKP167-201ENST00000411047 285 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 BTF3P9-201ENST00000418784 283 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1A1P48729 AC073464.3-201ENST00000422564 712 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.9□□□□□ -1.79
CSNK1A1P48729 RPL23AP1-201ENST00000428990 471 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 Z85994.2-201ENST00000434327 452 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 ARL5AP3-201ENST00000439327 386 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 AC114495.1-201ENST00000441274 436 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 TXNP2-201ENST00000443918 295 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.9□□□□□ -1.79
CSNK1A1P48729 HMGB3P21-201ENST00000452483 547 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.9□□□□□ -1.79
CSNK1A1P48729 NDUFA12P1-201ENST00000455914 406 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms