Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC079171.1-201ENST00000568788 914 ntBASIC4.27□□□□□ -1.73
HTTP42858 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC4.27□□□□□ -1.73
HTTP42858 AC090246.1-201ENST00000616499 426 ntBASIC4.27□□□□□ -1.73
HTTP42858 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.27□□□□□ -1.73
HTTP42858 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HTTP42858 AL353743.1-202ENST00000431724 1695 ntBASIC4.27□□□□□ -1.73
HTTP42858 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HTTP42858 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HTTP42858 ZNF402P-201ENST00000404435 3100 ntBASIC4.27□□□□□ -1.73
HTTP42858 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
HTTP42858 UBE2V1P2-201ENST00000397758 440 ntBASIC4.27□□□□□ -1.73
HTTP42858 FABP3P2-201ENST00000453169 399 ntBASIC4.27□□□□□ -1.73
HTTP42858 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.27□□□□□ -1.73
HTTP42858 AL392088.2-201ENST00000637607 285 ntBASIC4.27□□□□□ -1.73
HTTP42858 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HTTP42858 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HTTP42858 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HTTP42858 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 OR10J6P-201ENST00000289731 930 ntBASIC4.26□□□□□ -1.73
HTTP42858 SNORD9-201ENST00000362566 104 ntBASIC4.26□□□□□ -1.73
HTTP42858 SNORD35B-201ENST00000363660 87 ntBASIC4.26□□□□□ -1.73
HTTP42858 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 AC087650.1-201ENST00000431445 468 ntBASIC4.26□□□□□ -1.73
HTTP42858 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.26□□□□□ -1.73
HTTP42858 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 AC103843.2-201ENST00000530523 682 ntBASIC4.26□□□□□ -1.73
HTTP42858 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.26□□□□□ -1.73
HTTP42858 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.26□□□□□ -1.73
HTTP42858 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 AL121878.1-201ENST00000418638 859 ntBASIC4.26□□□□□ -1.73
HTTP42858 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 AL831737.1-201ENST00000441288 271 ntBASIC4.26□□□□□ -1.73
HTTP42858 AC010486.1-201ENST00000511793 424 ntBASIC4.26□□□□□ -1.73
HTTP42858 SUMO2P19-201ENST00000518920 295 ntBASIC4.26□□□□□ -1.73
HTTP42858 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.26□□□□□ -1.73
HTTP42858 MAPK10-253ENST00000641010 4072 ntBASIC4.26□□□□□ -1.73
HTTP42858 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.26□□□□□ -1.73
HTTP42858 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 RPS26P4-201ENST00000431743 355 ntBASIC4.26□□□□□ -1.73
HTTP42858 RPL21P110-201ENST00000433345 446 ntBASIC4.26□□□□□ -1.73
HTTP42858 RSL24D1P3-201ENST00000449255 495 ntBASIC4.26□□□□□ -1.73
HTTP42858 CCRL1P1-201ENST00000449542 1053 ntBASIC4.26□□□□□ -1.73
HTTP42858 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 MIR5004-201ENST00000579078 107 ntBASIC4.26□□□□□ -1.73
HTTP42858 AC006504.3-201ENST00000586818 523 ntBASIC4.26□□□□□ -1.73
HTTP42858 ITSN2-213ENST00000622089 5805 ntTSL 5 BASIC4.26□□□□□ -1.73
HTTP42858 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HTTP42858 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 RANP8-201ENST00000444720 713 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC080014.1-201ENST00000496877 1201 ntBASIC4.25□□□□□ -1.73
HTTP42858 PTGES3P3-201ENST00000511479 482 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC090151.1-201ENST00000520784 730 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC007599.1-201ENST00000568688 1174 ntBASIC4.25□□□□□ -1.73
HTTP42858 RPL23AP87-202ENST00000573039 466 ntBASIC4.25□□□□□ -1.73
HTTP42858 AL451044.1-201ENST00000604867 238 ntBASIC4.25□□□□□ -1.73
HTTP42858 COX6CP4-201ENST00000605798 228 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC4.25□□□□□ -1.73
HTTP42858 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.25□□□□□ -1.73
HTTP42858 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 SNORA80A-201ENST00000363922 136 ntBASIC4.25□□□□□ -1.73
HTTP42858 RNA5SP80-201ENST00000410475 111 ntBASIC4.25□□□□□ -1.73
HTTP42858 AL160175.1-201ENST00000428124 247 ntBASIC4.25□□□□□ -1.73
HTTP42858 RPL26P28-201ENST00000451325 435 ntBASIC4.25□□□□□ -1.73
HTTP42858 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.25□□□□□ -1.73
HTTP42858 NCAPGP2-201ENST00000557911 754 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.25□□□□□ -1.73
HTTP42858 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 AC090337.1-201ENST00000579651 2074 ntBASIC4.25□□□□□ -1.73
HTTP42858 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 AP002001.2-201ENST00000529025 1469 ntBASIC4.25□□□□□ -1.73
HTTP42858 AC068733.2-201ENST00000605434 1418 ntBASIC4.25□□□□□ -1.73
HTTP42858 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HTTP42858 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
HTTP42858 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HTTP42858 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.24□□□□□ -1.73
HTTP42858 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.24□□□□□ -1.73
HTTP42858 RNA5SP126-201ENST00000365092 109 ntBASIC4.24□□□□□ -1.73
HTTP42858 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.24□□□□□ -1.73
HTTP42858 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.24□□□□□ -1.73
HTTP42858 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.24□□□□□ -1.73
HTTP42858 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms