Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.2□□□□□ -1.74
RPA3P35244 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.2□□□□□ -1.74
RPA3P35244 AL359715.5-201ENST00000623431 443 ntBASIC4.2□□□□□ -1.74
RPA3P35244 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.2□□□□□ -1.74
RPA3P35244 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPA3P35244 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.2□□□□□ -1.74
RPA3P35244 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
RPA3P35244 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
RPA3P35244 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.2□□□□□ -1.74
RPA3P35244 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.2□□□□□ -1.74
RPA3P35244 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.19□□□□□ -1.74
RPA3P35244 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 AC018529.3-201ENST00000624212 2254 ntBASIC4.19□□□□□ -1.74
RPA3P35244 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
RPA3P35244 MARK2P15-201ENST00000432204 2186 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AC017007.4-201ENST00000503353 1352 ntBASIC4.19□□□□□ -1.74
RPA3P35244 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 OR4K17-201ENST00000315543 1032 ntBASIC4.19□□□□□ -1.74
RPA3P35244 RNU4-39P-201ENST00000362455 127 ntBASIC4.19□□□□□ -1.74
RPA3P35244 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.19□□□□□ -1.74
RPA3P35244 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 MIR1179-201ENST00000408703 91 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AC011933.1-201ENST00000413334 321 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AL807761.1-201ENST00000417622 171 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
RPA3P35244 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.19□□□□□ -1.74
RPA3P35244 AL732292.1-201ENST00000426692 226 ntBASIC4.19□□□□□ -1.74
RPA3P35244 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.19□□□□□ -1.74
RPA3P35244 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.19□□□□□ -1.74
RPA3P35244 AL138787.1-202ENST00000437804 898 ntBASIC4.19□□□□□ -1.74
RPA3P35244 RPL23AP52-201ENST00000439311 478 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AC116533.1-201ENST00000459748 321 ntBASIC4.19□□□□□ -1.74
RPA3P35244 RPL31P61-201ENST00000496160 376 ntBASIC4.19□□□□□ -1.74
RPA3P35244 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.19□□□□□ -1.74
RPA3P35244 AC109458.1-201ENST00000508858 316 ntBASIC4.19□□□□□ -1.74
RPA3P35244 OR8G5-201ENST00000524943 1041 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 AC107016.1-201ENST00000550463 337 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.19□□□□□ -1.74
RPA3P35244 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.19□□□□□ -1.74
RPA3P35244 HMGB1P50-201ENST00000605814 607 ntBASIC4.19□□□□□ -1.74
RPA3P35244 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.19□□□□□ -1.74
RPA3P35244 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.19□□□□□ -1.74
RPA3P35244 LINC00901.1-201ENST00000617252 152 ntBASIC4.19□□□□□ -1.74
RPA3P35244 AP003497.2-201ENST00000624220 967 ntBASIC4.19□□□□□ -1.74
RPA3P35244 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.19□□□□□ -1.74
RPA3P35244 EIF2AP4-201ENST00000424793 1781 ntBASIC4.19□□□□□ -1.74
RPA3P35244 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
RPA3P35244 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.18□□□□□ -1.74
RPA3P35244 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.18□□□□□ -1.74
RPA3P35244 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
RPA3P35244 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 RNA5SP509-201ENST00000364577 119 ntBASIC4.18□□□□□ -1.74
RPA3P35244 BMS1P3-201ENST00000372011 932 ntBASIC4.18□□□□□ -1.74
RPA3P35244 SNORA68.2-201ENST00000391263 128 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AC016397.1-201ENST00000412463 242 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.18□□□□□ -1.74
RPA3P35244 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.18□□□□□ -1.74
RPA3P35244 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.18□□□□□ -1.74
RPA3P35244 RPL18P10-201ENST00000425606 538 ntBASIC4.18□□□□□ -1.74
RPA3P35244 RPS3AP54-201ENST00000435535 734 ntBASIC4.18□□□□□ -1.74
RPA3P35244 CBX1P1-201ENST00000440184 427 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AL512326.1-201ENST00000443050 721 ntBASIC4.18□□□□□ -1.74
RPA3P35244 SERPINA7P1-201ENST00000443077 631 ntBASIC4.18□□□□□ -1.74
RPA3P35244 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.18□□□□□ -1.74
RPA3P35244 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.18□□□□□ -1.74
RPA3P35244 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.18□□□□□ -1.74
RPA3P35244 PPM1AP1-201ENST00000502740 1135 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.18□□□□□ -1.74
RPA3P35244 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.18□□□□□ -1.74
RPA3P35244 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
RPA3P35244 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.18□□□□□ -1.74
RPA3P35244 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.18□□□□□ -1.74
RPA3P35244 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.18□□□□□ -1.74
RPA3P35244 AC119501.1-201ENST00000603646 475 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AL773545.4-201ENST00000637262 310 ntBASIC4.18□□□□□ -1.74
RPA3P35244 AL513478.4-201ENST00000641636 310 ntBASIC4.18□□□□□ -1.74
RPA3P35244 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
RPA3P35244 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPA3P35244 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
RPA3P35244 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RPA3P35244 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPA3P35244 FAR2P2-201ENST00000413041 594 ntBASIC4.17□□□□□ -1.74
RPA3P35244 FAR2P4-202ENST00000425399 584 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC234779.1-201ENST00000425910 285 ntBASIC4.17□□□□□ -1.74
RPA3P35244 TRGV7-201ENST00000427089 353 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC023141.6-201ENST00000429418 337 ntBASIC4.17□□□□□ -1.74
RPA3P35244 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms