Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 AC106734.1-201ENST00000568646 663 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AP000919.1-202ENST00000581139 1264 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.3□□□□□ -1.56
CIITAP33076 AC234771.5-201ENST00000600161 514 ntBASIC5.3□□□□□ -1.56
CIITAP33076 Z99289.3-201ENST00000605586 594 ntBASIC5.3□□□□□ -1.56
CIITAP33076 OR7A19P-201ENST00000608051 733 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.3□□□□□ -1.56
CIITAP33076 AL022393.1-201ENST00000625142 1677 ntBASIC5.3□□□□□ -1.56
CIITAP33076 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.3□□□□□ -1.56
CIITAP33076 DHX40P1-201ENST00000588725 1412 ntBASIC5.3□□□□□ -1.56
CIITAP33076 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CIITAP33076 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.29□□□□□ -1.56
CIITAP33076 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 OR4K15-201ENST00000305051 1216 ntBASIC5.29□□□□□ -1.56
CIITAP33076 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 SNORD113.2-201ENST00000364166 89 ntBASIC5.29□□□□□ -1.56
CIITAP33076 RNU6-398P-201ENST00000384143 109 ntBASIC5.29□□□□□ -1.56
CIITAP33076 RNU4-31P-201ENST00000384211 141 ntBASIC5.29□□□□□ -1.56
CIITAP33076 ANAPC10P1-201ENST00000395991 556 ntBASIC5.29□□□□□ -1.56
CIITAP33076 RPS16P5-201ENST00000406501 404 ntBASIC5.29□□□□□ -1.56
CIITAP33076 OR6C64P-201ENST00000419708 825 ntBASIC5.29□□□□□ -1.56
CIITAP33076 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 HSPE1P16-201ENST00000426640 348 ntBASIC5.29□□□□□ -1.56
CIITAP33076 MTCO1P43-201ENST00000431831 488 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC099063.2-201ENST00000446360 662 ntBASIC5.29□□□□□ -1.56
CIITAP33076 RPS17P11-201ENST00000474297 293 ntBASIC5.29□□□□□ -1.56
CIITAP33076 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC007016.1-201ENST00000512110 244 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 snoU109.6-201ENST00000516831 118 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 OR8A2P-201ENST00000528631 952 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.29□□□□□ -1.56
CIITAP33076 AL049870.4-201ENST00000555741 486 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.29□□□□□ -1.56
CIITAP33076 AC004223.2-201ENST00000590309 544 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AL160237.3-201ENST00000604114 1013 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AP002802.2-201ENST00000605877 235 ntBASIC5.29□□□□□ -1.56
CIITAP33076 MIR6798-201ENST00000612887 67 ntBASIC5.29□□□□□ -1.56
CIITAP33076 VN1R9P-201ENST00000614184 867 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC079395.3-201ENST00000615161 484 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AL669942.2-201ENST00000620352 697 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.29□□□□□ -1.56
CIITAP33076 AC004232.3-201ENST00000622977 525 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC068057.2-201ENST00000624047 895 ntBASIC5.29□□□□□ -1.56
CIITAP33076 AC006927.2-201ENST00000639256 389 ntBASIC5.29□□□□□ -1.56
CIITAP33076 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CIITAP33076 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CIITAP33076 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
CIITAP33076 AC135352.1-201ENST00000506173 1418 ntBASIC5.29□□□□□ -1.56
CIITAP33076 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.29□□□□□ -1.56
CIITAP33076 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 AC104260.2-201ENST00000623551 3497 ntBASIC5.29□□□□□ -1.56
CIITAP33076 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CIITAP33076 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.29□□□□□ -1.56
CIITAP33076 PCAT14-202ENST00000627127 3935 ntBASIC5.29□□□□□ -1.56
CIITAP33076 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CIITAP33076 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CIITAP33076 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 MFSD8-213ENST00000641134 1327 ntBASIC5.28□□□□□ -1.56
CIITAP33076 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 RNU6-666P-201ENST00000363499 107 ntBASIC5.28□□□□□ -1.56
CIITAP33076 RNA5SP505-201ENST00000364748 108 ntBASIC5.28□□□□□ -1.56
CIITAP33076 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CIITAP33076 OR2AH1P-201ENST00000425717 928 ntBASIC5.28□□□□□ -1.56
CIITAP33076 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC5.28□□□□□ -1.56
CIITAP33076 YWHAZP2-201ENST00000440317 728 ntBASIC5.28□□□□□ -1.56
CIITAP33076 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.28□□□□□ -1.56
CIITAP33076 EIF2S2P2-201ENST00000447161 982 ntBASIC5.28□□□□□ -1.56
CIITAP33076 MTCYBP11-201ENST00000447254 1109 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AL591363.1-201ENST00000450091 483 ntBASIC5.28□□□□□ -1.56
CIITAP33076 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC5.28□□□□□ -1.56
CIITAP33076 SYT14P1-201ENST00000481459 721 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms