Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AL451044.1-201ENST00000604867 238 ntBASIC6.42□□□□□ -1.38
CLIP1P30622 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC6.41□□□□□ -1.38
CLIP1P30622 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CLIP1P30622 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CLIP1P30622 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP1P30622 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CLIP1P30622 MIR208A-201ENST00000362287 71 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 RNU6-213P-201ENST00000384051 104 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 MIR449B-201ENST00000384995 97 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 AC069157.1-201ENST00000421749 137 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 GCA-203ENST00000429691 824 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP1P30622 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.41□□□□□ -1.38
CLIP1P30622 RPL37P1-201ENST00000432310 284 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP1P30622 AL500522.2-201ENST00000448562 343 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 AC007688.1-201ENST00000475592 759 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 NDUFA5P2-201ENST00000519723 344 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP1P30622 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.41□□□□□ -1.38
CLIP1P30622 AC107982.3-201ENST00000584957 985 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP1P30622 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC6.41□□□□□ -1.38
CLIP1P30622 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC6.41□□□□□ -1.38
CLIP1P30622 AL121890.2-201ENST00000617644 465 ntBASIC6.41□□□□□ -1.38
CLIP1P30622 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CLIP1P30622 AC006042.3-201ENST00000454684 1469 ntBASIC6.4□□□□□ -1.38
CLIP1P30622 AC016588.2-201ENST00000632484 3021 ntBASIC6.4□□□□□ -1.38
CLIP1P30622 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC6.4□□□□□ -1.38
CLIP1P30622 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.4□□□□□ -1.38
CLIP1P30622 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC6.4□□□□□ -1.38
CLIP1P30622 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC6.4□□□□□ -1.38
CLIP1P30622 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CLIP1P30622 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.4□□□□□ -1.39
CLIP1P30622 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.4□□□□□ -1.39
CLIP1P30622 FAM91A3P-201ENST00000456826 2544 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 SNORD35B-201ENST00000363660 87 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 SNORD46.1-201ENST00000364139 104 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 PVALB-202ENST00000404171 422 ntTSL 2 BASIC6.4□□□□□ -1.39
CLIP1P30622 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC6.4□□□□□ -1.39
CLIP1P30622 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC6.4□□□□□ -1.39
CLIP1P30622 HLA-N-201ENST00000437516 135 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
CLIP1P30622 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.4□□□□□ -1.39
CLIP1P30622 CR392039.5-201ENST00000623201 510 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 AC073530.2-201ENST00000623987 261 ntBASIC6.4□□□□□ -1.39
CLIP1P30622 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
CLIP1P30622 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP1P30622 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP1P30622 RNA5SP146-201ENST00000410743 123 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 RPL6P5-201ENST00000445678 828 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP1P30622 ARL4AP1-201ENST00000503220 705 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CLIP1P30622 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP1P30622 MTND6P33-201ENST00000571794 183 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 AC090312.1-201ENST00000580637 348 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 AC012417.1-201ENST00000582307 1039 ntBASIC6.39□□□□□ -1.39
CLIP1P30622 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
CLIP1P30622 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC6.39□□□□□ -1.39
CLIP1P30622 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC6.39□□□□□ -1.39
CLIP1P30622 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CLIP1P30622 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP1P30622 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP1P30622 ST7-221ENST00000465133 2155 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP1P30622 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC6.38□□□□□ -1.39
CLIP1P30622 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.38□□□□□ -1.39
CLIP1P30622 HSPD1P11-201ENST00000508643 1702 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP1P30622 SAMMSON-213ENST00000641336 1521 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 AC092435.4-201ENST00000623012 4159 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 5S_rRNA.1-201ENST00000364415 116 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 RN7SKP97-201ENST00000410966 333 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 NOTCH2P1-201ENST00000443481 624 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.38□□□□□ -1.39
CLIP1P30622 RPL7P15-201ENST00000461190 712 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 RPS26P28-201ENST00000470806 348 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP1P30622 PPBPP1-201ENST00000510807 373 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP1P30622 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP1P30622 AC091516.1-201ENST00000549191 703 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.38□□□□□ -1.39
CLIP1P30622 CYP4A43P-201ENST00000568156 121 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 AC004777.1-201ENST00000624317 287 ntBASIC6.38□□□□□ -1.39
CLIP1P30622 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CLIP1P30622 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CLIP1P30622 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP1P30622 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP1P30622 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
CLIP1P30622 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
CLIP1P30622 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC6.37□□□□□ -1.39
CLIP1P30622 FABP3P2-201ENST00000453169 399 ntBASIC6.37□□□□□ -1.39
CLIP1P30622 TRMT10BP1-201ENST00000519377 943 ntBASIC6.37□□□□□ -1.39
CLIP1P30622 AC093524.1-201ENST00000564266 1094 ntBASIC6.37□□□□□ -1.39
CLIP1P30622 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.37□□□□□ -1.39
CLIP1P30622 AC104662.1-201ENST00000604448 511 ntBASIC6.37□□□□□ -1.39
CLIP1P30622 AL354798.1-201ENST00000622505 329 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms