Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.16□□□□□ -1.74
SHC1P29353 AC068620.3-201ENST00000602749 560 ntBASIC4.16□□□□□ -1.74
SHC1P29353 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.16□□□□□ -1.74
SHC1P29353 HMGB1P51-201ENST00000605166 638 ntBASIC4.16□□□□□ -1.74
SHC1P29353 AC004775.1-201ENST00000607389 753 ntBASIC4.16□□□□□ -1.74
SHC1P29353 AC073342.3-201ENST00000624211 193 ntBASIC4.16□□□□□ -1.74
SHC1P29353 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.16□□□□□ -1.74
SHC1P29353 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.16□□□□□ -1.74
SHC1P29353 OR6C71P-202ENST00000641886 1107 ntBASIC4.16□□□□□ -1.74
SHC1P29353 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHC1P29353 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHC1P29353 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHC1P29353 AC068254.2-201ENST00000623938 3577 ntBASIC4.16□□□□□ -1.74
SHC1P29353 AC012618.3-205ENST00000637896 1496 ntBASIC4.16□□□□□ -1.74
SHC1P29353 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.16□□□□□ -1.74
SHC1P29353 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHC1P29353 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHC1P29353 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHC1P29353 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
SHC1P29353 Z98755.1-201ENST00000407015 1384 ntBASIC4.15□□□□□ -1.74
SHC1P29353 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SHC1P29353 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.74
SHC1P29353 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHC1P29353 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.15□□□□□ -1.74
SHC1P29353 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SHC1P29353 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.15□□□□□ -1.74
SHC1P29353 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHC1P29353 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SHC1P29353 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHC1P29353 VDAC2P1-201ENST00000399358 958 ntBASIC4.15□□□□□ -1.75
SHC1P29353 RPS16P5-201ENST00000406501 404 ntBASIC4.15□□□□□ -1.75
SHC1P29353 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 MTND4LP13-201ENST00000425022 298 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.15□□□□□ -1.75
SHC1P29353 AC114973.1-201ENST00000429057 632 ntBASIC4.15□□□□□ -1.75
SHC1P29353 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 AL512661.1-201ENST00000434586 1253 ntBASIC4.15□□□□□ -1.75
SHC1P29353 MTND2P21-201ENST00000436242 1042 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC004854.1-201ENST00000440356 349 ntBASIC4.15□□□□□ -1.75
SHC1P29353 MOB1AP2-201ENST00000446060 614 ntBASIC4.15□□□□□ -1.75
SHC1P29353 RPL31P20-201ENST00000449593 360 ntBASIC4.15□□□□□ -1.75
SHC1P29353 NPM1P39-201ENST00000449818 867 ntBASIC4.15□□□□□ -1.75
SHC1P29353 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHC1P29353 AL133244.1-201ENST00000456007 258 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 SCARNA10-201ENST00000459255 330 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 RPL23AP65-201ENST00000475608 468 ntBASIC4.15□□□□□ -1.75
SHC1P29353 RN7SL205P-201ENST00000490174 284 ntBASIC4.15□□□□□ -1.75
SHC1P29353 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHC1P29353 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.15□□□□□ -1.75
SHC1P29353 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.15□□□□□ -1.75
SHC1P29353 FABP5P6-201ENST00000510588 409 ntBASIC4.15□□□□□ -1.75
SHC1P29353 RNU6-319P-201ENST00000516025 108 ntBASIC4.15□□□□□ -1.75
SHC1P29353 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 AP001781.1-201ENST00000530977 207 ntBASIC4.15□□□□□ -1.75
SHC1P29353 UBTFL9-201ENST00000534504 1148 ntBASIC4.15□□□□□ -1.75
SHC1P29353 OR5AN2P-201ENST00000534535 896 ntBASIC4.15□□□□□ -1.75
SHC1P29353 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.15□□□□□ -1.75
SHC1P29353 GLRXP2-201ENST00000555594 321 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 AC084759.1-201ENST00000561168 290 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC027455.1-201ENST00000574104 594 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 BNIP3P38-201ENST00000601117 544 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC013244.3-201ENST00000605614 388 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.15□□□□□ -1.75
SHC1P29353 AC006946.3-201ENST00000609791 756 ntBASIC4.15□□□□□ -1.75
SHC1P29353 SNX18P1Y-201ENST00000616231 511 ntBASIC4.15□□□□□ -1.75
SHC1P29353 AC099654.9-201ENST00000637055 678 ntBASIC4.15□□□□□ -1.75
SHC1P29353 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.15□□□□□ -1.75
SHC1P29353 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SHC1P29353 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.15□□□□□ -1.75
SHC1P29353 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SHC1P29353 KARSP3-201ENST00000571212 1504 ntBASIC4.15□□□□□ -1.75
SHC1P29353 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SHC1P29353 ZNF137P-201ENST00000456718 1920 ntBASIC4.15□□□□□ -1.75
SHC1P29353 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
SHC1P29353 AL355852.1-201ENST00000454081 1771 ntBASIC4.14□□□□□ -1.75
SHC1P29353 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SHC1P29353 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 OR14L1P-202ENST00000641545 3009 ntBASIC4.14□□□□□ -1.75
SHC1P29353 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 AL132640.2-201ENST00000559968 1698 ntBASIC4.14□□□□□ -1.75
SHC1P29353 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.14□□□□□ -1.75
SHC1P29353 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 RNA5SP28-201ENST00000363841 119 ntBASIC4.14□□□□□ -1.75
SHC1P29353 SNORD113.2-201ENST00000364166 89 ntBASIC4.14□□□□□ -1.75
SHC1P29353 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SHC1P29353 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms