Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RPL31P52-201ENST00000407532 367 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN3P26045 RN7SKP247-201ENST00000411094 308 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
PTPN3P26045 AL935212.3-201ENST00000450729 284 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 ISCUP1-201ENST00000454451 448 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 RPL32P14-201ENST00000463196 378 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 IGLV2-34-201ENST00000490007 283 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 AC011005.3-201ENST00000491624 395 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN3P26045 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN3P26045 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.71□□□□□ -1.66
PTPN3P26045 OR5D15P-201ENST00000531671 942 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN3P26045 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.71□□□□□ -1.66
PTPN3P26045 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC4.71□□□□□ -1.66
PTPN3P26045 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 MIR4716-201ENST00000579628 84 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 AC124283.4-201ENST00000581815 456 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 ABI1P1-201ENST00000603375 1120 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.71□□□□□ -1.66
PTPN3P26045 SNORD91B-202ENST00000608459 222 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 U6.48-201ENST00000618523 106 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 U3.53-201ENST00000628922 216 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.71□□□□□ -1.66
PTPN3P26045 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PTPN3P26045 RNF6P1-201ENST00000444889 1784 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC010300.1-201ENST00000600671 5134 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC027290.2-201ENST00000623210 18662 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 OR4K17-201ENST00000315543 1032 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PTPN3P26045 RN7SKP115-201ENST00000363177 317 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 SNORA58B-201ENST00000364259 136 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 GCNT6-201ENST00000379591 934 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC012519.1-201ENST00000424588 610 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 MTND2P8-201ENST00000450555 1025 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN3P26045 SCARNA10-201ENST00000459255 330 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC104763.1-201ENST00000475274 360 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC105233.1-201ENST00000498840 781 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.7□□□□□ -1.66
PTPN3P26045 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN3P26045 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN3P26045 RNA5SP446-201ENST00000515955 82 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.7□□□□□ -1.66
PTPN3P26045 OR5M2P-201ENST00000529003 936 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC025260.1-201ENST00000548858 430 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 SETP1-201ENST00000556014 845 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC106734.1-201ENST00000568646 663 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC090312.1-201ENST00000580637 348 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC007448.1-201ENST00000582714 234 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.7□□□□□ -1.66
PTPN3P26045 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.7□□□□□ -1.66
PTPN3P26045 AC011374.2-201ENST00000607135 526 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 AC018645.2-201ENST00000609151 472 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 CR392039.4-201ENST00000624968 501 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 OR2L1P-202ENST00000641567 1023 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 KARSP3-201ENST00000571212 1504 ntBASIC4.7□□□□□ -1.66
PTPN3P26045 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
PTPN3P26045 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
PTPN3P26045 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PTPN3P26045 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PTPN3P26045 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PTPN3P26045 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN3P26045 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PTPN3P26045 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTPN3P26045 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.69□□□□□ -1.66
PTPN3P26045 HSPD1P14-201ENST00000432666 1618 ntBASIC4.69□□□□□ -1.66
PTPN3P26045 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTPN3P26045 AC139713.2-215ENST00000641428 5037 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms