Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RPS12P17-201ENST00000438591 377 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL663074.2-201ENST00000440621 479 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 MTND1P18-201ENST00000448191 573 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL591363.1-201ENST00000450091 483 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC096741.1-201ENST00000472250 846 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 RPS4XP1-201ENST00000482189 787 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 MTCYBP17-201ENST00000503579 789 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC021678.3-201ENST00000517893 476 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 SUGT1P3-202ENST00000604259 383 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL512329.2-201ENST00000607350 548 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC090229.1-201ENST00000590983 1609 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC092692.1-201ENST00000623625 2595 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 CASC19-284ENST00000642142 1868 ntBASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CSB-PGBD3P0DP91 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC092821.3-202ENST00000641304 2767 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 CBX3P1-201ENST00000325243 554 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 RNA5SP319-201ENST00000362768 119 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 RNU6-619P-201ENST00000365146 108 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 MIR217-201ENST00000384817 110 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 MIR181A1-201ENST00000385026 110 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 ARPC3P1-201ENST00000437218 533 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC005532.2-201ENST00000467154 373 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AL355032.1-201ENST00000472981 438 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC072039.1-201ENST00000477611 581 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 RPS7P6-201ENST00000485777 579 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 IGBP1P5-201ENST00000507524 1000 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 SUMO2P7-201ENST00000511179 285 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 HAUS8P1-201ENST00000549005 542 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC090312.2-201ENST00000582687 378 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AL365503.1-201ENST00000605247 905 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 MIR7973-1-201ENST00000614683 76 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 RPSAP73-201ENST00000614820 330 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC023509.5-201ENST00000617434 807 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 CR381653.2-201ENST00000624041 768 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 MIR3688-2-201ENST00000636963 87 ntBASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CSB-PGBD3P0DP91 AC005618.1-201ENST00000606901 3148 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 RNF6P1-201ENST00000444889 1784 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 DOCK11P1-201ENST00000553480 5932 ntBASIC7.74□□□□□ -1.17
CSB-PGBD3P0DP91 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms