Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
CXCL1P09341 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 MIR1179-201ENST00000408703 91 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RNU6-603P-201ENST00000411403 107 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RPL23AP26-201ENST00000412728 464 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.21□□□□□ -1.9
CXCL1P09341 RPL6P29-201ENST00000414863 865 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 CHEK2P5-201ENST00000423877 246 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 HMGB1P32-201ENST00000425971 565 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 NPM1P26-201ENST00000426339 738 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RPS12P10-201ENST00000427031 377 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 RPL23AP93-201ENST00000440847 484 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 AL500522.2-201ENST00000448562 343 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 MTCO3P20-201ENST00000454926 688 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RPL7P22-201ENST00000466005 733 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 RPS27AP16-201ENST00000492222 470 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 BNIP3P41-201ENST00000503774 571 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC006499.3-201ENST00000506077 748 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC026784.1-201ENST00000507986 352 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCL1P09341 SNORD116-26-201ENST00000516006 96 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCL1P09341 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 OR8X1P-201ENST00000534542 869 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.21□□□□□ -1.9
CXCL1P09341 GNRHR2P1-201ENST00000555315 631 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 VN1R79P-201ENST00000593540 513 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC011445.2-201ENST00000599274 173 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 EIF1P6-201ENST00000600054 334 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.21□□□□□ -1.9
CXCL1P09341 AC098935.2-201ENST00000604222 466 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 AC010200.2-201ENST00000605098 235 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 MIR6853-201ENST00000619642 74 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.21□□□□□ -1.9
CXCL1P09341 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL1P09341 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.21□□□□□ -1.9
CXCL1P09341 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CXCL1P09341 AC009313.2-201ENST00000417893 1941 ntBASIC3.21□□□□□ -1.9
CXCL1P09341 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.2□□□□□ -1.9
CXCL1P09341 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 IPO8P1-201ENST00000455509 3109 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 RIOK3P1-201ENST00000418778 1528 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 RNU6-146P-201ENST00000384602 108 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 MIR3065-201ENST00000390137 79 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 RN7SKP213-201ENST00000410746 298 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL450992.3-201ENST00000413192 568 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.2□□□□□ -1.9
CXCL1P09341 AC002075.2-201ENST00000425207 252 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC022022.1-201ENST00000430304 178 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL391987.1-201ENST00000441025 200 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.2□□□□□ -1.9
CXCL1P09341 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCL1P09341 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 AC144530.1-201ENST00000452862 555 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL354710.1-201ENST00000453641 246 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 RPS27AP17-201ENST00000463344 455 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC004069.2-201ENST00000505438 1114 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 AC026726.1-201ENST00000512859 601 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCL1P09341 AL121576.1-201ENST00000556055 276 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC009117.1-201ENST00000563948 554 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 MIR3186-201ENST00000577404 85 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 MIR3691-201ENST00000578066 90 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 MIR4330-201ENST00000579077 105 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 FAM106CP-201ENST00000582212 507 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC3.2□□□□□ -1.9
CXCL1P09341 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CXCL1P09341 BMS1P7-201ENST00000602440 1052 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL713998.2-201ENST00000604538 1198 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.2□□□□□ -1.9
CXCL1P09341 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.2□□□□□ -1.9
CXCL1P09341 AC006946.3-201ENST00000609791 756 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 MIR6768-201ENST00000610734 72 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AL592295.2-201ENST00000612578 206 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.2□□□□□ -1.9
CXCL1P09341 FP325313.1-201ENST00000638228 703 ntBASIC3.2□□□□□ -1.9
CXCL1P09341 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CXCL1P09341 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms