Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.73□□□□□ -1.49
HLA-DOAP06340 AC104454.1-201ENST00000421341 1401 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 RBPJP2-201ENST00000618187 1444 ntBASIC5.73□□□□□ -1.49
HLA-DOAP06340 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HLA-DOAP06340 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DOAP06340 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 RNU1-32P-201ENST00000363937 159 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DOAP06340 U6.112-201ENST00000384129 70 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC136624.1-201ENST00000400791 413 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 RN7SKP106-201ENST00000410832 272 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC013429.2-201ENST00000418798 781 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 TIMM9P2-201ENST00000419324 266 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 SEPT2P1-201ENST00000419651 180 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC005345.1-201ENST00000431868 217 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 MTCO3P5-201ENST00000433620 714 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 NANOGP2-201ENST00000435391 727 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AL445567.1-201ENST00000439121 144 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC118469.1-201ENST00000442943 488 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 PTENP1-201ENST00000447117 1215 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AL589880.1-201ENST00000448271 287 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 RPL12P20-201ENST00000475538 479 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 RPL5P22-201ENST00000480199 884 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DOAP06340 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 RNU1-6P-201ENST00000516290 144 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 RN7SL802P-201ENST00000577858 299 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC103987.3-201ENST00000582071 292 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC019193.2-201ENST00000610012 634 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 RNA5SP439-201ENST00000617595 124 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC123767.1-202ENST00000620407 817 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC068792.1-201ENST00000621354 417 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC067852.7-201ENST00000623270 535 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC021106.3-201ENST00000623925 531 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HLA-DOAP06340 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.72□□□□□ -1.49
HLA-DOAP06340 AC011447.7-201ENST00000624228 1590 ntBASIC5.72□□□□□ -1.49
HLA-DOAP06340 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
HLA-DOAP06340 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DOAP06340 HSPD1P11-201ENST00000508643 1702 ntBASIC5.71□□□□□ -1.49
HLA-DOAP06340 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DOAP06340 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.71□□□□□ -1.49
HLA-DOAP06340 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HLA-DOAP06340 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 Y_RNA.505-201ENST00000384489 102 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 HMGB1P10-201ENST00000395823 563 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 GLULP6-201ENST00000399502 913 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 AL356131.1-201ENST00000405826 414 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 AC079809.1-201ENST00000415468 276 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 LINC00993-201ENST00000420453 540 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 AC011233.1-201ENST00000422812 283 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 FABP7P1-201ENST00000424004 391 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOAP06340 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOAP06340 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 MTND2P4-201ENST00000445034 1004 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 CYCSP24-201ENST00000445119 316 ntBASIC5.71□□□□□ -1.5
HLA-DOAP06340 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.71□□□□□ -1.5
HLA-DOAP06340 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
HLA-DOAP06340 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms