Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.82□□□□□ -1.8
SPTA1P02549 YPEL5P2-201ENST00000605553 359 ntBASIC3.82□□□□□ -1.8
SPTA1P02549 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPTA1P02549 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SPTA1P02549 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SPTA1P02549 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPTA1P02549 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPTA1P02549 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPTA1P02549 RNA5SP36-201ENST00000410197 133 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 RN7SKP182-201ENST00000410772 298 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AC017015.1-201ENST00000477387 286 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AK4P6-201ENST00000505168 528 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC120057.2-201ENST00000571520 271 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AC079880.2-201ENST00000603790 1213 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC055839.1-201ENST00000634467 498 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AC139769.1-204ENST00000472297 1931 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SPTA1P02549 AC099654.3-201ENST00000447087 1546 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
SPTA1P02549 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 APOOP2-201ENST00000461561 539 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.81□□□□□ -1.8
SPTA1P02549 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.81□□□□□ -1.8
SPTA1P02549 CASC19-203ENST00000523510 575 ntTSL 3 BASIC3.81□□□□□ -1.8
SPTA1P02549 CYCSP40-201ENST00000575927 294 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.81□□□□□ -1.8
SPTA1P02549 FP325313.1-201ENST00000638228 703 ntBASIC3.81□□□□□ -1.8
SPTA1P02549 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.8□□□□□ -1.8
SPTA1P02549 MIR128-1-201ENST00000384921 82 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC093719.1-202ENST00000392735 373 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 RPL21P43-201ENST00000425440 472 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC012671.1-201ENST00000451912 203 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 MRPL35P4-201ENST00000453682 566 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 HSPD1P15-201ENST00000505573 1122 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.8□□□□□ -1.8
SPTA1P02549 HSPE1P5-201ENST00000561489 272 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC107294.1-201ENST00000609524 467 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 CR392039.4-201ENST00000624968 501 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 TET1P1-201ENST00000426627 2301 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 YES1-203ENST00000577961 4554 ntTSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SPTA1P02549 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 MTCO1P24-201ENST00000515438 1558 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SPTA1P02549 AC091286.1-201ENST00000431233 461 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.8□□□□□ -1.8
SPTA1P02549 PTP4A1P3-201ENST00000433661 420 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.8□□□□□ -1.8
SPTA1P02549 HMGN1P15-201ENST00000513870 295 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC027309.2-201ENST00000520566 192 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 CYCSP30-201ENST00000546447 172 ntBASIC3.8□□□□□ -1.8
SPTA1P02549 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.8□□□□□ -1.8
SPTA1P02549 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SPTA1P02549 FTX-210ENST00000603037 8347 ntTSL 5 BASIC3.8□□□□□ -1.8
SPTA1P02549 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SPTA1P02549 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
SPTA1P02549 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 AL160175.1-201ENST00000428124 247 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC004938.1-201ENST00000438468 308 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC021660.1-201ENST00000465006 554 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AC112206.1-201ENST00000468416 477 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AC093853.1-201ENST00000515689 483 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.79□□□□□ -1.8
SPTA1P02549 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.79□□□□□ -1.8
SPTA1P02549 OR8G7P-201ENST00000616658 848 ntBASIC3.79□□□□□ -1.8
SPTA1P02549 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.79□□□□□ -1.8
SPTA1P02549 AC116096.1-201ENST00000566804 2314 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms