Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 YPEL5P3-201ENST00000547227 352 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 MIR6867-201ENST00000610636 67 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTDNEP1O95476 AC005332.5-201ENST00000591222 2919 ntBASIC4.66□□□□□ -1.66
CTDNEP1O95476 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.66□□□□□ -1.66
CTDNEP1O95476 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTDNEP1O95476 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.65□□□□□ -1.66
CTDNEP1O95476 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTDNEP1O95476 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 AC083863.1-201ENST00000438811 231 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 IGBP1P5-201ENST00000507524 1000 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTDNEP1O95476 MRPL49P2-201ENST00000521066 465 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 GNRHR2P1-201ENST00000555315 631 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 OR1AB1P-201ENST00000585564 761 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 AP001005.3-201ENST00000622049 129 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 AC018555.1-201ENST00000567548 1980 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTDNEP1O95476 AL606537.1-201ENST00000607258 2011 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.65□□□□□ -1.67
CTDNEP1O95476 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.65□□□□□ -1.67
CTDNEP1O95476 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CTDNEP1O95476 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDNEP1O95476 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AL121657.1-201ENST00000327215 531 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 SNORA60-201ENST00000362396 134 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC068538.1-201ENST00000376856 336 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 ENSAP1-201ENST00000392855 326 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 AMZ2P2-201ENST00000406819 1057 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDNEP1O95476 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 RPS27AP18-201ENST00000515536 459 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC083809.1-201ENST00000615051 472 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 AC074276.2-201ENST00000619891 348 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CTDNEP1O95476 CASC19-255ENST00000641733 1385 ntBASIC4.64□□□□□ -1.67
CTDNEP1O95476 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 BMS1P3-201ENST00000372011 932 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 MIR141-201ENST00000384975 95 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 AL034379.1-201ENST00000423216 253 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 OR5BE1P-201ENST00000425977 939 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 KCTD9P3-201ENST00000434597 1169 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 RPSAP41-201ENST00000439695 860 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 AL451050.1-201ENST00000450126 415 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 RN7SL271P-201ENST00000487601 295 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 RN7SKP122-201ENST00000515923 296 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 AC087369.1-201ENST00000520775 996 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 DYNLL1P4-201ENST00000549314 266 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 AC128687.2-201ENST00000609657 566 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 AC124312.6-202ENST00000623624 418 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 MIR6830-201ENST00000636015 70 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 MIR492-201ENST00000638676 116 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 OR5BE1P-202ENST00000641168 1176 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 Z82217.1-201ENST00000625157 8149 ntBASIC4.63□□□□□ -1.67
CTDNEP1O95476 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CTDNEP1O95476 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.63□□□□□ -1.67
CTDNEP1O95476 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 AC093775.1-201ENST00000624154 1868 ntBASIC4.62□□□□□ -1.67
CTDNEP1O95476 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.62□□□□□ -1.67
CTDNEP1O95476 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms