Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC022893.2-201ENST00000564832 3296 ntBASIC3.91□□□□□ -1.78
SGCEO43556 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SGCEO43556 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SGCEO43556 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
SGCEO43556 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SGCEO43556 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
SGCEO43556 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SGCEO43556 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
SGCEO43556 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SGCEO43556 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
SGCEO43556 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SGCEO43556 DHX40P1-201ENST00000588725 1412 ntBASIC3.9□□□□□ -1.78
SGCEO43556 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 AC106871.1-201ENST00000568324 3102 ntBASIC3.9□□□□□ -1.79
SGCEO43556 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 MIR659-201ENST00000384963 97 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL078604.1-201ENST00000404609 466 ntBASIC3.9□□□□□ -1.79
SGCEO43556 TRIM60P17-201ENST00000415181 719 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 RBMY2KP-201ENST00000418221 992 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AC048351.1-201ENST00000420064 602 ntBASIC3.9□□□□□ -1.79
SGCEO43556 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 CDY14P-201ENST00000431260 1014 ntBASIC3.9□□□□□ -1.79
SGCEO43556 CDY12P-201ENST00000440679 1015 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 CDY13P-201ENST00000445813 1015 ntBASIC3.9□□□□□ -1.79
SGCEO43556 HMGB1P16-201ENST00000447155 540 ntBASIC3.9□□□□□ -1.79
SGCEO43556 CDY23P-201ENST00000451661 1014 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL513533.1-201ENST00000453728 415 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 AC106872.2-201ENST00000494303 480 ntBASIC3.9□□□□□ -1.79
SGCEO43556 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.9□□□□□ -1.79
SGCEO43556 AC139783.2-201ENST00000504847 1145 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.9□□□□□ -1.79
SGCEO43556 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.9□□□□□ -1.79
SGCEO43556 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.9□□□□□ -1.79
SGCEO43556 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.9□□□□□ -1.79
SGCEO43556 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.9□□□□□ -1.79
SGCEO43556 AC007424.1-203ENST00000554613 687 ntBASIC3.9□□□□□ -1.79
SGCEO43556 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 AC010615.3-201ENST00000597319 394 ntBASIC3.9□□□□□ -1.79
SGCEO43556 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.9□□□□□ -1.79
SGCEO43556 AC068790.7-201ENST00000602347 528 ntBASIC3.9□□□□□ -1.79
SGCEO43556 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.9□□□□□ -1.79
SGCEO43556 AC010201.1-201ENST00000605051 540 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AC100847.1-201ENST00000611316 481 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL353726.1-201ENST00000614041 1000 ntBASIC3.9□□□□□ -1.79
SGCEO43556 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 AC007546.2-201ENST00000623996 360 ntBASIC3.9□□□□□ -1.79
SGCEO43556 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 OR2L1P-202ENST00000641567 1023 ntBASIC3.9□□□□□ -1.79
SGCEO43556 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.9□□□□□ -1.79
SGCEO43556 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.9□□□□□ -1.79
SGCEO43556 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.9□□□□□ -1.79
SGCEO43556 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SGCEO43556 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.9□□□□□ -1.79
SGCEO43556 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SGCEO43556 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
SGCEO43556 RNA5SP307-201ENST00000362863 116 ntBASIC3.89□□□□□ -1.79
SGCEO43556 RNA5SP22-201ENST00000365393 109 ntBASIC3.89□□□□□ -1.79
SGCEO43556 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SGCEO43556 GLULP6-201ENST00000399502 913 ntBASIC3.89□□□□□ -1.79
SGCEO43556 RPS16P5-201ENST00000406501 404 ntBASIC3.89□□□□□ -1.79
SGCEO43556 RPS20P14-201ENST00000412545 360 ntBASIC3.89□□□□□ -1.79
SGCEO43556 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.89□□□□□ -1.79
SGCEO43556 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 UBTFL3-201ENST00000418934 1024 ntBASIC3.89□□□□□ -1.79
SGCEO43556 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.89□□□□□ -1.79
SGCEO43556 NDUFA5P1-201ENST00000433858 341 ntBASIC3.89□□□□□ -1.79
SGCEO43556 PPIAP17-201ENST00000438507 471 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 HMGB3P21-201ENST00000452483 547 ntBASIC3.89□□□□□ -1.79
SGCEO43556 FABP3P2-201ENST00000453169 399 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.89□□□□□ -1.79
SGCEO43556 UBTFL6-201ENST00000477929 1024 ntBASIC3.89□□□□□ -1.79
SGCEO43556 MIR2114-201ENST00000516645 80 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.89□□□□□ -1.79
SGCEO43556 AC107016.1-201ENST00000550463 337 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.89□□□□□ -1.79
SGCEO43556 AC020914.4-201ENST00000597690 277 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.89□□□□□ -1.79
SGCEO43556 Z98200.1-201ENST00000607298 470 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.89□□□□□ -1.79
SGCEO43556 uc_338.32-201ENST00000615087 172 ntBASIC3.89□□□□□ -1.79
SGCEO43556 AC000123.2-201ENST00000623124 461 ntBASIC3.89□□□□□ -1.79
SGCEO43556 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms