Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AL355816.1-201ENST00000607951 118 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC100827.5-201ENST00000615883 426 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC018926.3-201ENST00000618841 406 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC090527.3-201ENST00000619041 548 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC068792.1-201ENST00000621354 417 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 AC138393.1-206ENST00000540997 1886 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM38O00635 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM38O00635 ASNSP1-204ENST00000641977 1664 ntBASIC5.28□□□□□ -1.56
TRIM38O00635 AC114947.2-201ENST00000565748 2125 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 THAP12P5-201ENST00000405864 2275 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 RN7SKP103-201ENST00000363848 320 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 RNU6-224P-201ENST00000384055 107 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 AL021331.1-201ENST00000402817 582 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 CTSL3P-202ENST00000412179 788 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC211486.3-201ENST00000412694 621 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 HIGD1AP15-201ENST00000416198 280 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 RPS26P30-201ENST00000443431 335 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC012512.1-201ENST00000446594 718 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 USP9YP10-201ENST00000454868 628 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC090114.3-201ENST00000479267 829 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 USP9YP5-201ENST00000511770 630 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC008494.2-201ENST00000514544 370 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC115085.1-201ENST00000588924 229 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC245036.5-201ENST00000596330 847 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AC095055.1-201ENST00000603472 1113 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
TRIM38O00635 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC010975.3-201ENST00000618727 978 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AL031667.3-201ENST00000620124 655 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 AC083843.2-201ENST00000568248 6253 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM38O00635 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 AC134882.1-201ENST00000603738 1676 ntBASIC5.27□□□□□ -1.57
TRIM38O00635 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM38O00635 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM38O00635 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM38O00635 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TRIM38O00635 RNU4-4P-201ENST00000364588 130 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC093719.1-202ENST00000392735 373 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AP002530.1-201ENST00000405705 684 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RNA5SP487-201ENST00000410186 122 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 RPL12P9-201ENST00000412942 488 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM38O00635 NPM1P24-201ENST00000428039 894 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 RPL7P4-203ENST00000430239 730 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC234064.1-201ENST00000436312 247 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM38O00635 MTND2P20-201ENST00000440805 661 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 HMGB3P6-201ENST00000444896 598 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 EIF2S2P2-201ENST00000447161 982 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 DNAJB5P1-201ENST00000454004 806 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 AC069528.1-202ENST00000482888 637 ntBASIC5.26□□□□□ -1.57
TRIM38O00635 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
TRIM38O00635 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms