Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC073136.2-201ENST00000417282 849 ntBASIC4.82□□□□□ -1.64
O00370 AC069213.2-201ENST00000420238 366 ntBASIC4.82□□□□□ -1.64
O00370 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 RAD23BP1-201ENST00000421404 1227 ntBASIC4.82□□□□□ -1.64
O00370 AC073464.3-201ENST00000422564 712 ntBASIC4.82□□□□□ -1.64
O00370 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.82□□□□□ -1.64
O00370 DYNLL1P7-201ENST00000429273 258 ntBASIC4.82□□□□□ -1.64
O00370 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 ZNF965P-201ENST00000432501 817 ntBASIC4.82□□□□□ -1.64
O00370 AL138878.2-201ENST00000440581 1241 ntBASIC4.82□□□□□ -1.64
O00370 RPL23AP93-201ENST00000440847 484 ntBASIC4.82□□□□□ -1.64
O00370 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.82□□□□□ -1.64
O00370 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.82□□□□□ -1.64
O00370 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
O00370 RNU6-1218P-201ENST00000458990 108 ntBASIC4.82□□□□□ -1.64
O00370 CABYRP1-201ENST00000465493 1045 ntBASIC4.82□□□□□ -1.64
O00370 RPS26P28-201ENST00000470806 348 ntBASIC4.82□□□□□ -1.64
O00370 OR52A4P-201ENST00000472867 958 ntBASIC4.82□□□□□ -1.64
O00370 AC108022.1-201ENST00000493466 478 ntBASIC4.82□□□□□ -1.64
O00370 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.82□□□□□ -1.64
O00370 AC034244.2-201ENST00000514668 858 ntBASIC4.82□□□□□ -1.64
O00370 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.82□□□□□ -1.64
O00370 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.82□□□□□ -1.64
O00370 AP003049.1-201ENST00000529418 457 ntBASIC4.82□□□□□ -1.64
O00370 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
O00370 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.82□□□□□ -1.64
O00370 AC090515.3-201ENST00000560431 315 ntBASIC4.82□□□□□ -1.64
O00370 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.82□□□□□ -1.64
O00370 AC010200.2-201ENST00000605098 235 ntBASIC4.82□□□□□ -1.64
O00370 AC100847.1-201ENST00000611316 481 ntBASIC4.82□□□□□ -1.64
O00370 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 AC009704.2-201ENST00000618739 483 ntBASIC4.82□□□□□ -1.64
O00370 RPL23AP61-201ENST00000623642 466 ntBASIC4.82□□□□□ -1.64
O00370 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
O00370 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 AC114546.3-201ENST00000623582 1734 ntBASIC4.82□□□□□ -1.64
O00370 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
O00370 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
O00370 LINC00622-201ENST00000562811 1570 ntBASIC4.82□□□□□ -1.64
O00370 AC093535.2-201ENST00000624769 2326 ntBASIC4.81□□□□□ -1.64
O00370 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
O00370 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.81□□□□□ -1.64
O00370 MIR92A2-201ENST00000385299 75 ntBASIC4.81□□□□□ -1.64
O00370 GLULP6-201ENST00000399502 913 ntBASIC4.81□□□□□ -1.64
O00370 RPL26P37-201ENST00000411983 438 ntBASIC4.81□□□□□ -1.64
O00370 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.81□□□□□ -1.64
O00370 AC119751.6-201ENST00000416712 186 ntBASIC4.81□□□□□ -1.64
O00370 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 UQCRBP1-201ENST00000421129 336 ntBASIC4.81□□□□□ -1.64
O00370 AL121882.1-201ENST00000422893 417 ntBASIC4.81□□□□□ -1.64
O00370 RPL21P91-201ENST00000429231 479 ntBASIC4.81□□□□□ -1.64
O00370 MTCO3P21-201ENST00000430791 643 ntBASIC4.81□□□□□ -1.64
O00370 HMGB3P9-201ENST00000441799 583 ntBASIC4.81□□□□□ -1.64
O00370 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.81□□□□□ -1.64
O00370 AL162591.2-201ENST00000449634 317 ntBASIC4.81□□□□□ -1.64
O00370 RPS29P33-201ENST00000456717 146 ntBASIC4.81□□□□□ -1.64
O00370 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 AC010468.3-201ENST00000508225 458 ntBASIC4.81□□□□□ -1.64
O00370 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
O00370 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 CDH12P4-201ENST00000517835 295 ntBASIC4.81□□□□□ -1.64
O00370 CDH12P3-201ENST00000517935 295 ntBASIC4.81□□□□□ -1.64
O00370 CDH12P1-201ENST00000518435 295 ntBASIC4.81□□□□□ -1.64
O00370 HIGD1AP18-201ENST00000520730 278 ntBASIC4.81□□□□□ -1.64
O00370 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 OSBPL9P3-201ENST00000534523 595 ntBASIC4.81□□□□□ -1.64
O00370 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
O00370 NPM1P47-201ENST00000560843 856 ntBASIC4.81□□□□□ -1.64
O00370 AC091178.1-203ENST00000584586 279 ntBASIC4.81□□□□□ -1.64
O00370 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.81□□□□□ -1.64
O00370 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.81□□□□□ -1.64
O00370 RPL7P50-201ENST00000600588 727 ntBASIC4.81□□□□□ -1.64
O00370 AC090181.2-201ENST00000602975 672 ntBASIC4.81□□□□□ -1.64
O00370 AC098483.2-201ENST00000603158 454 ntBASIC4.81□□□□□ -1.64
O00370 AC008782.1-201ENST00000603386 430 ntBASIC4.81□□□□□ -1.64
O00370 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.81□□□□□ -1.64
O00370 AL096803.3-201ENST00000609032 532 ntBASIC4.81□□□□□ -1.64
O00370 AC015813.4-201ENST00000610469 179 ntBASIC4.81□□□□□ -1.64
O00370 AL445493.3-201ENST00000619568 477 ntBASIC4.81□□□□□ -1.64
O00370 AL669942.2-201ENST00000620352 697 ntBASIC4.81□□□□□ -1.64
O00370 AL049536.1-201ENST00000625043 744 ntBASIC4.81□□□□□ -1.64
O00370 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.81□□□□□ -1.64
O00370 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
O00370 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
O00370 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
O00370 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
O00370 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
O00370 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
O00370 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
O00370 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.81□□□□□ -1.64
O00370 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
O00370 AC010329.2-201ENST00000595195 2737 ntBASIC4.81□□□□□ -1.64
O00370 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
O00370 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
O00370 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms