Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL450326.2-201ENST00000421913 1962 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 LAP3P1-201ENST00000403648 294 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 VDAC1P9-201ENST00000412766 841 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 TPTE2P1-204ENST00000435256 593 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC114495.1-201ENST00000441274 436 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL512326.1-201ENST00000443050 721 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL451050.1-201ENST00000450126 415 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC108475.1-201ENST00000507880 950 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC124068.1-201ENST00000563131 678 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC234775.3-201ENST00000564612 656 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP003400.2-201ENST00000624036 666 ntBASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.24□□□□□ -1.73
TMX2-CTNND1H3BSU7 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 MAPK10-304ENST00000641341 3984 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 NANOGP6-201ENST00000429190 847 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC122718.1-201ENST00000439448 744 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC079804.1-201ENST00000461922 436 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RPS27AP17-201ENST00000463344 455 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 FAM133DP-201ENST00000464802 691 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC010374.1-201ENST00000503762 1237 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 HMGB3P13-201ENST00000511263 607 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC008676.3-201ENST00000521237 435 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 IFITM8P-201ENST00000522529 394 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC106785.1-201ENST00000565935 262 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC079791.1-201ENST00000605356 973 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RMST_9.1-201ENST00000619945 193 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AP003497.2-201ENST00000624220 967 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNA5SP196-201ENST00000625967 102 ntBASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
TMX2-CTNND1H3BSU7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 MIR331-201ENST00000362302 94 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 RNU1-13P-201ENST00000384499 162 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 PPIAP31-201ENST00000405422 495 ntBASIC4.22□□□□□ -1.73
TMX2-CTNND1H3BSU7 AL512430.2-201ENST00000406786 339 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms