Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RGPD3A6NKT7 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 MIR1271-201ENST00000408537 86 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 RPS29P4-201ENST00000414733 161 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 OR2AH1P-201ENST00000425717 928 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC108751.2-201ENST00000469993 231 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 UBE2DNL-203ENST00000474922 222 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC005520.3-201ENST00000602874 370 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC083899.2-201ENST00000423285 1376 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC118273.1-201ENST00000525324 3006 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 RN7SKP167-201ENST00000411047 285 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AL133162.1-201ENST00000463228 453 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC005726.1-201ENST00000494679 427 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 HMGB3P16-201ENST00000508037 287 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 RNA5SP179-201ENST00000517284 121 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 NDUFA5P2-201ENST00000519723 344 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC087369.1-201ENST00000520775 996 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 MIR5187-201ENST00000583479 76 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 MIR432-201ENST00000606207 94 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AC011816.2-201ENST00000607089 556 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 AL645927.2-201ENST00000618350 349 ntBASIC5.16□□□□□ -1.58
RGPD3A6NKT7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.16□□□□□ -1.58
RGPD3A6NKT7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AC083863.1-201ENST00000438811 231 ntBASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AL591503.2-201ENST00000442314 1005 ntBASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 LSM3P2-201ENST00000551246 273 ntBASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.15□□□□□ -1.58
RGPD3A6NKT7 MIR3922-201ENST00000585192 84 ntBASIC5.15□□□□□ -1.58
RGPD3A6NKT7 AC091905.2-201ENST00000623143 306 ntBASIC5.15□□□□□ -1.58
RGPD3A6NKT7 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RGPD3A6NKT7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 BX510359.1-201ENST00000456973 237 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 TPT1P1-201ENST00000458495 518 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AL355596.1-201ENST00000565399 3996 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 USP8P1-201ENST00000494673 3183 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 RNU1-44P-201ENST00000384453 163 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 U3.23-201ENST00000391132 200 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 TANK-206ENST00000406287 875 ntTSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC020914.6-201ENST00000594327 272 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC012493.2-201ENST00000595083 291 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 MIMT1-201ENST00000597105 1050 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 QTRT1P1-201ENST00000604344 1078 ntBASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.14□□□□□ -1.59
RGPD3A6NKT7 AC243312.2-201ENST00000623340 601 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms