Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LINC01881-201ENST00000416103 412 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 TBCAP2-201ENST00000416175 326 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AL732292.1-201ENST00000426692 226 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AL450023.3-201ENST00000440592 271 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 EEF1A1P1-201ENST00000447052 739 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 MTND2P30-201ENST00000456663 382 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC020898.1-201ENST00000474167 787 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC016559.2-201ENST00000510759 359 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 SNORA31.13-201ENST00000516624 135 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 VTA1P2-201ENST00000520205 911 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 KATNBL1P5-201ENST00000605015 517 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AP001033.2-201ENST00000609701 1003 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AL121873.1-201ENST00000616013 524 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC245389.2-201ENST00000616023 576 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00901.1-201ENST00000617252 152 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AC242843.1-201ENST00000618702 573 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 AL035461.2-201ENST00000619201 524 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 Z73965.1-201ENST00000623412 2297 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PCDHGA1Q9Y5H4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 USP9YP4-201ENST00000424401 1745 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AL450345.1-202ENST00000605741 3881 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 RNF6P1-201ENST00000444889 1784 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 FAM3C2-201ENST00000312214 681 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 RNA5SP479-201ENST00000364858 117 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 XKRYP4-201ENST00000414395 483 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 TCEA1P4-201ENST00000415066 844 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 ATG4AP1-201ENST00000416893 538 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MTCO3P4-201ENST00000419236 787 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 FABP7P1-201ENST00000424004 391 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MORF4L1P7-201ENST00000426038 703 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC097499.1-201ENST00000444277 208 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC239367.2-201ENST00000447309 705 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 XKRYP5-201ENST00000449659 483 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MTND2P6-201ENST00000455337 1030 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 RPL37P3-201ENST00000456825 293 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 NPM1P17-201ENST00000479221 602 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC005412.2-201ENST00000492004 341 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MTND3P24-201ENST00000506306 329 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 NDUFB4P12-201ENST00000513465 390 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 RNU2-30P-201ENST00000516209 141 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC022790.1-201ENST00000522872 204 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC133555.2-201ENST00000550213 292 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 RN7SL802P-201ENST00000577858 299 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CFTRP2-201ENST00000634304 199 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 OR2L1P-202ENST00000641567 1023 ntBASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
PCDHGA1Q9Y5H4 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms