Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC079168.2-201ENST00000453977 416 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ISCUP1-201ENST00000454451 448 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RPS5P7-201ENST00000456664 608 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 PPIAP19-201ENST00000486414 492 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC010285.3-201ENST00000511668 676 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RNU2-30P-201ENST00000516209 141 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RN7SKP70-201ENST00000516655 271 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 IGLV3-26-201ENST00000520756 302 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC024405.1-201ENST00000532521 1042 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 HNRNPCP4-201ENST00000571636 900 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 MIR4512-201ENST00000583257 77 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC008521.2-201ENST00000591021 259 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ZNF92P3-201ENST00000596594 954 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AC020914.4-201ENST00000597690 277 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 BNIP3P32-201ENST00000600015 554 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 FAM27B-201ENST00000610601 213 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 RNF6P1-201ENST00000444889 1784 ntBASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
KCNIP3Q9Y2W7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 U3.2-201ENST00000362981 210 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 MTND3P20-201ENST00000407663 186 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 U3.36-201ENST00000408418 213 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 RN7SKP267-201ENST00000410381 285 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 LINC01881-201ENST00000416103 412 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 HLA-N-201ENST00000437516 135 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 RPL7P33-201ENST00000444159 742 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL645939.1-201ENST00000453429 797 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 YRDCP3-201ENST00000456507 480 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 RPS4XP1-201ENST00000482189 787 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC093663.2-201ENST00000484625 313 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC140172.1-201ENST00000502928 141 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 OR5M7P-201ENST00000526140 972 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 OR10G5P-201ENST00000532733 358 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC092490.3-201ENST00000545370 572 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 VN1R79P-201ENST00000593540 513 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 VN1R84P-201ENST00000593697 235 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC244505.7-201ENST00000599675 272 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 ABI1P1-201ENST00000603375 1120 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC020910.3-201ENST00000603701 874 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL391358.1-201ENST00000605342 190 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL627230.1-201ENST00000613077 211 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC244100.4-201ENST00000617747 388 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL391684.1-202ENST00000641293 1636 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 MFSD4BP1-201ENST00000513330 1552 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AL353743.4-201ENST00000422653 1547 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC007529.1-201ENST00000418574 2178 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 AC010300.1-201ENST00000600671 5134 ntBASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
KCNIP3Q9Y2W7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 NXPH1-205ENST00000602349 1953 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 AL442639.1-201ENST00000625030 1899 ntBASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
KCNIP3Q9Y2W7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms