Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC015922.4-201ENST00000612568 690 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AL031985.3-201ENST00000565390 2449 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC010300.1-201ENST00000600671 5134 ntBASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.02□□□□□ -1.77
TRAPPC4Q9Y296 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RAD17P1-201ENST00000418130 2042 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RNA5SP388-201ENST00000362584 119 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 MIR659-201ENST00000384963 97 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 NCSTNP1-201ENST00000406229 144 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RNU6-564P-201ENST00000410983 104 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 SNORA74C-2-201ENST00000411179 201 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 EIF4A1P3-201ENST00000411521 244 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RPL37P18-201ENST00000411602 243 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RPS23P10-201ENST00000416185 486 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AJ239321.1-201ENST00000424255 564 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 NPM1P26-201ENST00000426339 738 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CDY14P-201ENST00000431260 1014 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CDY12P-201ENST00000440679 1015 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 TXNP2-201ENST00000443918 295 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CDY13P-201ENST00000445813 1015 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 CDY23P-201ENST00000451661 1014 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 DDX39BP2-208ENST00000453923 258 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RPL23AP71-201ENST00000470966 469 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 SNORA48.9-201ENST00000516419 162 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 SNORA70.17-201ENST00000516449 133 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 OR5AN2P-201ENST00000534535 896 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AL592494.3-201ENST00000609485 464 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 AC087565.3-202ENST00000642085 1603 ntBASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRAPPC4Q9Y296 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AL132640.2-201ENST00000559968 1698 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC027287.1-201ENST00000553115 1453 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 RNA5SP505-201ENST00000364748 108 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 MIR585-201ENST00000384887 94 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AL356387.2-201ENST00000422272 243 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC007064.3-201ENST00000422608 359 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 RPL7AP25-201ENST00000423357 805 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC114495.1-201ENST00000441274 436 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC243772.1-201ENST00000451620 410 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 RN7SL812P-201ENST00000493791 279 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC111000.3-201ENST00000508057 576 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AP001160.4-201ENST00000596971 382 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC020914.4-201ENST00000597690 277 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC005191.1-201ENST00000603950 358 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 MIR6891-201ENST00000618788 93 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AL035461.2-201ENST00000619201 524 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 MIR7703-201ENST00000620784 77 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 OR2L1P-202ENST00000641567 1023 ntBASIC4□□□□□ -1.77
TRAPPC4Q9Y296 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
TRAPPC4Q9Y296 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRAPPC4Q9Y296 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms