Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SNORA67-201ENST00000384423 137 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SNORA40.2-201ENST00000390847 128 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 LRRC37BP1-201ENST00000398851 714 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC092745.2-202ENST00000411880 369 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 FAR2P2-201ENST00000413041 594 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RPF2P1-201ENST00000424137 906 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 FAR2P4-202ENST00000425399 584 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RAC1P8-201ENST00000427086 527 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 CYCSP11-201ENST00000436426 315 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 OR6K5P-201ENST00000447050 945 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL672138.1-201ENST00000450604 1015 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL935212.3-201ENST00000450729 284 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 RPL7P48-201ENST00000461513 746 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 PRDX3P4-201ENST00000470828 747 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC069528.1-202ENST00000482888 637 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 EIF3KP3-201ENST00000514461 639 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 snoZ278.1-201ENST00000517059 112 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 MIR4480-201ENST00000582492 71 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 VN1R83P-201ENST00000595685 445 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL118522.2-201ENST00000616045 615 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 MIR6810-201ENST00000622701 70 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC145207.9-201ENST00000623802 325 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AP003400.3-201ENST00000624904 346 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AL353662.3-201ENST00000625131 237 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AP003399.1-201ENST00000637534 361 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AP001642.1-201ENST00000624727 2117 ntBASIC5.09□□□□□ -1.59
VPS4AQ9UN37 AC011755.1-201ENST00000623763 2049 ntBASIC5.09□□□□□ -1.6
VPS4AQ9UN37 ADAM5-202ENST00000399789 1942 ntBASIC5.09□□□□□ -1.6
VPS4AQ9UN37 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.09□□□□□ -1.6
VPS4AQ9UN37 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VPS4AQ9UN37 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
VPS4AQ9UN37 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
VPS4AQ9UN37 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 ZNF652P1-201ENST00000442420 1309 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 RN7SKP153-201ENST00000365026 316 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 SNORD116-2-201ENST00000384274 95 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 SNORD116-6-201ENST00000384711 96 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 MIR141-201ENST00000384975 95 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AL079342.2-201ENST00000403367 482 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AL136131.1-201ENST00000406079 803 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC124944.2-201ENST00000429866 1242 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC009263.1-201ENST00000441193 1239 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 PTENP1-201ENST00000447117 1215 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC009220.1-201ENST00000451614 275 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC083982.1-201ENST00000485679 344 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 SNRPCP2-201ENST00000504370 475 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 ENPP7P11-201ENST00000505915 627 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 RNU5A-4P-201ENST00000516588 111 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.08□□□□□ -1.6
VPS4AQ9UN37 CYP2C60P-201ENST00000566088 139 ntBASIC5.08□□□□□ -1.6
VPS4AQ9UN37 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 252.4 ms