Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 AC007342.7-201ENST00000624610 2337 ntBASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
SHROOM4Q9ULL8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 MIR133A2-201ENST00000347538 102 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 RNA5SP119-201ENST00000362715 117 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AL136131.1-201ENST00000406079 803 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AC069157.1-201ENST00000421749 137 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 OR6K4P-201ENST00000423179 955 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 MTATP6P11-201ENST00000428071 670 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AL445584.1-201ENST00000431451 330 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 CALM1P2-201ENST00000452941 448 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 HNRNPDLP3-201ENST00000456745 380 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AL354984.3-201ENST00000604803 325 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 RNU4-89P-201ENST00000607443 133 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AC009501.3-201ENST00000605001 1352 ntBASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC8.4□□□□□ -1.06
SHROOM4Q9ULL8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 SPATA2P1-201ENST00000431223 2055 ntBASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 AP005435.3-201ENST00000531260 3198 ntBASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC8.4□□□□□ -1.07
SHROOM4Q9ULL8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 RNA5SP151-201ENST00000365632 117 ntBASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 RPL23AP4-201ENST00000427757 463 ntBASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 OR9N1P-202ENST00000494289 481 ntBASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AC017100.2-201ENST00000584628 355 ntBASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 AL731532.2-201ENST00000623542 1953 ntBASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
SHROOM4Q9ULL8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 Z74021.1-201ENST00000423610 407 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 MTCO1P54-201ENST00000430139 712 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 MRPL50P1-201ENST00000431951 384 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 TCEA1P3-201ENST00000443005 880 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC104651.2-201ENST00000447549 528 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC093770.1-201ENST00000511559 571 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 FTH1P21-201ENST00000512179 511 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC040174.2-201ENST00000602701 465 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 OR4H6P-202ENST00000603819 340 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 SNORA51-201ENST00000606420 132 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AL096803.3-201ENST00000609032 532 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AL031658.2-201ENST00000616850 651 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 SLC2A3P1-201ENST00000519666 1451 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 MTCYBP12-201ENST00000440559 1134 ntBASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC8.38□□□□□ -1.07
SHROOM4Q9ULL8 OR5BC1P-201ENST00000529327 739 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms