Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AC100757.1-201ENST00000616872 1835 ntBASIC5.11□□□□□ -1.59
RLIMQ9NVW2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RLIMQ9NVW2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
RLIMQ9NVW2 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RLIMQ9NVW2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RNA5SP131-201ENST00000365452 119 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 Y_RNA.559-201ENST00000384686 107 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL589647.1-201ENST00000402485 466 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL662874.1-201ENST00000426065 230 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RPS26P40-201ENST00000435209 294 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MTND1P34-201ENST00000438556 671 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MTND1P30-201ENST00000441241 901 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC005297.1-201ENST00000444765 862 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 HMGN1P2-201ENST00000445197 310 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MTCO2P18-201ENST00000457151 658 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RPS4XP12-201ENST00000461747 709 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC069304.1-201ENST00000491593 704 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC112198.1-201ENST00000505369 1220 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RPL7L1P13-201ENST00000511702 739 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC008494.2-201ENST00000514544 370 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MTCO1P30-201ENST00000515244 580 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 RNA5SP230-201ENST00000517039 122 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 OR5AK1P-201ENST00000524837 922 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL359219.2-201ENST00000555184 348 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL512347.1-201ENST00000566420 503 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 ROCK1P1-201ENST00000573767 549 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MIR4660-201ENST00000583549 74 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL391497.1-201ENST00000608671 547 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL031667.3-201ENST00000620124 655 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AL078621.3-201ENST00000623707 2042 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC090582.1-201ENST00000636321 199 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MKKS-204ENST00000639674 192 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MAPK10-338ENST00000641647 3362 ntBASIC5.1□□□□□ -1.59
RLIMQ9NVW2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RLIMQ9NVW2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 MRRFP1-201ENST00000435941 1675 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AC114786.1-201ENST00000512892 1415 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 TRIM51GP-201ENST00000534741 1350 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 U3.23-201ENST00000391132 200 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 RNA5SP241-201ENST00000391326 114 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 ATP5F1P4-201ENST00000397288 746 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AC068533.2-201ENST00000411872 306 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 RPL7P8-201ENST00000411964 730 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 MTCO3P1-205ENST00000422088 832 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 REREP1Y-201ENST00000422655 198 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.09□□□□□ -1.59
RLIMQ9NVW2 MED14P1-201ENST00000430517 648 ntBASIC5.09□□□□□ -1.59
RLIMQ9NVW2 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms