Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 OR5M2P-201ENST00000529003 936 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC090515.3-201ENST00000560431 315 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC093765.1-201ENST00000603758 881 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC131238.1-201ENST00000617135 328 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AP003400.6-201ENST00000624698 740 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC022893.2-201ENST00000564832 3296 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 AC135352.1-201ENST00000506173 1418 ntBASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
BLOC1S4Q9NUP1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
BLOC1S4Q9NUP1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL590240.1-201ENST00000334118 313 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL359643.1-201ENST00000404109 423 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 MTCO2P1-201ENST00000424648 477 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CDY14P-201ENST00000431260 1014 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CDY12P-201ENST00000440679 1015 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL158053.1-201ENST00000441503 453 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CDY13P-201ENST00000445813 1015 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CDY23P-201ENST00000451661 1014 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 HMGB3P21-201ENST00000452483 547 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 CYCSP34-201ENST00000458172 304 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 TPT1P1-201ENST00000458495 518 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC011005.3-201ENST00000491624 395 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 HPRT1P2-201ENST00000505250 544 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 RN7SKP283-201ENST00000517197 270 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC011611.5-201ENST00000552477 578 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 HNRNPCP4-201ENST00000571636 900 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AP005229.2-201ENST00000609980 697 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC008759.3-201ENST00000613300 508 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC009704.2-201ENST00000618739 483 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AC017104.5-201ENST00000637647 639 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 Z95327.2-201ENST00000414579 1873 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 AL049555.1-201ENST00000562834 1933 ntBASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
BLOC1S4Q9NUP1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 SAGE2P-201ENST00000420011 2126 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AL592494.2-201ENST00000425455 1548 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 ATG4AP1-201ENST00000416893 538 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 Z74021.1-201ENST00000423610 407 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 TMX2P1-201ENST00000436507 708 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC016831.4-201ENST00000438302 307 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 H2AFZP5-201ENST00000446960 382 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 RPL23AP37-201ENST00000479658 549 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC083982.1-201ENST00000485679 344 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC090079.2-201ENST00000575289 768 ntBASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.2□□□□□ -1.58
BLOC1S4Q9NUP1 AC068880.4-201ENST00000623082 495 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms