Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC018529.3-201ENST00000624212 2254 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 XKRY2-202ENST00000623874 1581 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 XKRY-202ENST00000624960 1581 ntBASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.73□□□□□ -1.81
KIAA1549Q9HCM3 TPT1P2-201ENST00000413105 503 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 TMX2P1-201ENST00000436507 708 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 ARL4AP3-201ENST00000441452 574 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC006011.1-201ENST00000442758 349 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RN7SL542P-201ENST00000467147 294 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RPS29P19-201ENST00000479709 171 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 BNIP3P41-201ENST00000503774 571 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC006064.5-201ENST00000541782 248 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 MIR6875-201ENST00000617506 72 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC000123.3-201ENST00000624029 4975 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 A2MP1-204ENST00000566278 4130 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RNU1-15P-201ENST00000353977 144 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RNA5SP175-201ENST00000364275 119 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 PPIAP31-201ENST00000405422 495 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 PDSS1P1-201ENST00000422953 1114 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 TRGV7-201ENST00000427089 353 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 MRPL50P1-201ENST00000431951 384 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RPL23AP89-201ENST00000439324 255 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RPL38P1-201ENST00000460914 211 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 RNU4-89P-201ENST00000607443 133 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC099676.1-201ENST00000608886 657 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 OR7M1P-201ENST00000608946 533 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 AC138907.10-201ENST00000623708 983 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 MTND4P26-201ENST00000415971 1359 ntBASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
KIAA1549Q9HCM3 MFSD8-242ENST00000641690 4199 ntBASIC3.71□□□□□ -1.81
KIAA1549Q9HCM3 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
KIAA1549Q9HCM3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC092162.3-201ENST00000624511 1624 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 RCC2P2-201ENST00000422174 918 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AL117339.2-201ENST00000430475 180 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 PARP4P3-201ENST00000510265 317 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC008694.2-201ENST00000517591 306 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC120057.2-201ENST00000571520 271 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC107993.1-201ENST00000591343 684 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC006133.1-201ENST00000617106 264 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 RN7SKP224-201ENST00000364140 325 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 MIR1179-201ENST00000408703 91 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 RPS3AP25-201ENST00000411660 793 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC044797.1-201ENST00000445744 679 ntBASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KIAA1549Q9HCM3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms