Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.59□□□□□ -1.68
NXF3Q9H4D5 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 RNU11-4P-201ENST00000391149 133 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 VN1R31P-201ENST00000417498 730 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 MRPL50P1-201ENST00000431951 384 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 HSFY6P-201ENST00000445573 403 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 RNU4-18P-201ENST00000516751 149 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AP005901.4-201ENST00000577336 569 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AL109618.2-201ENST00000605527 211 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC067838.1-201ENST00000606064 577 ntBASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.58□□□□□ -1.68
NXF3Q9H4D5 AC092435.4-201ENST00000623012 4159 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC015813.6-201ENST00000624409 5808 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AL592182.3-201ENST00000642132 3304 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 SNORA37-201ENST00000384504 129 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 RNU6-1263P-201ENST00000384601 106 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 MT-RNR1-201ENST00000389680 954 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 RN7SKP199-201ENST00000410325 305 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 SEPT7P8-201ENST00000413308 775 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AL356276.2-201ENST00000435919 558 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 RAB9AP5-201ENST00000437794 597 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 RAB9AP2-201ENST00000443911 597 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC006326.1-201ENST00000445465 787 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 RPL23AP65-201ENST00000475608 468 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC022655.2-201ENST00000577280 318 ntBASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
NXF3Q9H4D5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AL450326.2-201ENST00000421913 1962 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RNA5SP22-201ENST00000365393 109 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 RNA5SP283-201ENST00000365604 119 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 MIR195-201ENST00000385194 87 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC096644.3-201ENST00000416788 338 ntBASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.56□□□□□ -1.68
NXF3Q9H4D5 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms