Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 DYNLL1P6-201ENST00000503440 264 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 DSTNP2-201ENST00000504533 515 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC109445.1-201ENST00000512356 383 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 HMGN1P9-201ENST00000515212 298 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 HNRNPKP5-201ENST00000515300 253 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 SCARNA20.4-201ENST00000516969 131 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC020937.1-201ENST00000519677 1013 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AP006245.2-201ENST00000522004 300 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC005832.3-201ENST00000537929 631 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL121766.1-201ENST00000547436 487 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC007599.1-201ENST00000568688 1174 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AF131215.7-201ENST00000602443 707 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC011453.2-201ENST00000603737 729 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL592221.1-201ENST00000605266 382 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC092653.1-201ENST00000608509 531 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL353726.1-201ENST00000614041 1000 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC023158.2-201ENST00000614876 543 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RN7SL544P-201ENST00000617232 284 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RN7SL763P-201ENST00000620922 284 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-368P-201ENST00000620928 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 RNU6-538P-201ENST00000622329 107 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC021106.3-201ENST00000623925 531 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 AC073869.8-201ENST00000641806 335 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 GVINP1-202ENST00000531871 7271 ntBASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
AMBRA1Q9C0C7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
AMBRA1Q9C0C7 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC007342.5-201ENST00000571340 2142 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 SNORA48.4-201ENST00000391089 134 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL121978.1-201ENST00000402778 359 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 RN7SKP222-201ENST00000410651 315 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 CTSL3P-202ENST00000412179 788 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 RPL7P44-201ENST00000424827 742 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL009174.1-201ENST00000426577 416 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC244035.1-201ENST00000430042 390 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 BX248409.1-201ENST00000455497 255 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC008885.2-201ENST00000509506 930 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC010587.2-201ENST00000511727 448 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 RNA5SP362-201ENST00000516048 118 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 CDC42P3-201ENST00000518493 633 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 AC087808.1-201ENST00000520501 361 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 MRPS16P1-201ENST00000523462 412 ntBASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.08□□□□□ -1.6
AMBRA1Q9C0C7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms