Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AC098799.1-201ENST00000504752 800 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 IGLVIV-65-201ENST00000517313 360 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 MTND1P6-201ENST00000523621 946 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AC009643.1-201ENST00000532030 391 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AC008638.3-201ENST00000603341 463 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 AP005019.3-201ENST00000620418 560 ntBASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.9□□□□□ -1.79
RSPO3Q9BXY4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AL158163.1-201ENST00000603915 1649 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 SNORD74.4-201ENST00000364129 80 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RNU1-132P-201ENST00000364300 164 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RN7SKP227-201ENST00000364445 330 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AP000357.1-201ENST00000409926 1165 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RNA5SP36-201ENST00000410197 133 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RBMY1KP-201ENST00000423480 476 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC091917.2-201ENST00000505002 744 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RNA5SP154-201ENST00000516193 111 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RNA5SP49-201ENST00000516450 115 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RN7SKP92-201ENST00000517266 244 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 SS18L2P2-201ENST00000583960 235 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 MIR4715-201ENST00000584117 79 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC010809.3-201ENST00000621310 641 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC025031.4-201ENST00000621248 3271 ntBASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RSPO3Q9BXY4 AC018529.3-201ENST00000624212 2254 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC074029.4-201ENST00000624796 1859 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC126755.2-208ENST00000327792 462 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC138969.1-213ENST00000331436 462 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 RNU1-14P-201ENST00000362759 152 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 MIR708-201ENST00000390708 88 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 U3.22-201ENST00000391120 215 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 NCSTNP1-201ENST00000406229 144 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 ELOCP19-201ENST00000411919 318 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC109327.1-201ENST00000471666 403 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AK3P4-201ENST00000504283 583 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 RNA5SP519-201ENST00000516480 119 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 TRAV11-201ENST00000539512 339 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC115989.2-201ENST00000578640 563 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC093765.1-201ENST00000603758 881 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AC090948.1-201ENST00000607464 549 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 AL354950.1-201ENST00000614150 568 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.88□□□□□ -1.79
RSPO3Q9BXY4 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms