Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CSMD1Q96PZ7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 HMGB2P1-201ENST00000591146 634 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC097461.1-201ENST00000568928 2821 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 MTND2P15-201ENST00000418575 892 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP446-201ENST00000515955 82 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AL121576.1-201ENST00000556055 276 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC005520.3-201ENST00000602874 370 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC006023.1-201ENST00000603944 259 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ATE1-AS1-202ENST00000636460 506 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AL365361.1-201ENST00000566942 3481 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC125257.1-201ENST00000560400 2930 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 RPL7P22-201ENST00000466005 733 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC097462.2-201ENST00000504623 481 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 RPL12P22-201ENST00000519073 490 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AC020914.6-201ENST00000594327 272 ntBASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CSMD1Q96PZ7 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AL136164.3-201ENST00000624429 3978 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 CCRL1P1-201ENST00000449542 1053 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RNU6-237P-201ENST00000515985 71 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC119744.1-201ENST00000454746 1715 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RNA5SP267-201ENST00000364893 126 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 EIF4A1P1-201ENST00000420241 934 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RSL24D1P3-201ENST00000449255 495 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC009506.2-201ENST00000420635 840 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC025750.2-201ENST00000442609 450 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 RPS3AP6-201ENST00000484430 795 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC007546.2-201ENST00000623996 360 ntBASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CSMD1Q96PZ7 AC022893.2-201ENST00000564832 3296 ntBASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CSMD1Q96PZ7 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms