Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AL139148.1-201ENST00000427122 680 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 CNOT7P2-201ENST00000441051 832 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RPS26P30-201ENST00000443431 335 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 PTENP1-201ENST00000447117 1215 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 NPM1P13-201ENST00000452663 865 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC091959.2-201ENST00000477363 321 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 SNRPCP2-201ENST00000504370 475 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC022832.1-201ENST00000530718 645 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AP002812.4-201ENST00000532139 286 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 OR11J2P-201ENST00000555298 907 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC069366.1-201ENST00000583159 838 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC015688.2-201ENST00000584523 262 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 PSMA6P4-201ENST00000603247 718 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AP005432.2-201ENST00000608162 586 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC092106.3-201ENST00000611308 722 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AP003485.2-201ENST00000623636 610 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 OR1S1-201ENST00000624470 978 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02211-204ENST00000642024 1070 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 ZNF876P-202ENST00000398732 1485 ntBASIC5.71□□□□□ -1.5
CDK5RAP3Q96JB5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 DDX18P4-201ENST00000511690 1966 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RPL23P2-201ENST00000320371 421 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 IGKV7-3-201ENST00000357453 298 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RNU4-92P-201ENST00000363783 136 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 MIR92A2-201ENST00000385299 75 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC013429.2-201ENST00000418798 781 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 DDX39BP1-205ENST00000422507 192 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RPS26P47-201ENST00000427219 348 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL929288.2-201ENST00000446368 407 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC092647.2-201ENST00000452998 253 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 VN1R40P-201ENST00000455196 941 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC021660.1-201ENST00000465006 554 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC004263.1-201ENST00000479327 332 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RPL23AP44-201ENST00000482216 473 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RN7SL591P-201ENST00000496150 292 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC010350.1-201ENST00000504908 231 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 HPRT1P2-201ENST00000505250 544 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC092593.2-201ENST00000513866 913 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 RNA5SP92-201ENST00000516437 110 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL359219.2-201ENST00000555184 348 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AP001542.2-201ENST00000593141 364 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC007349.4-201ENST00000608114 532 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC139769.3-201ENST00000618383 175 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 VN1R7P-201ENST00000619242 903 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC091304.6-201ENST00000619761 202 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC109454.4-201ENST00000623411 649 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AL355480.1-201ENST00000629041 99 ntBASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK5RAP3Q96JB5 AC104260.2-201ENST00000623551 3497 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 AC005261.4-201ENST00000600047 1385 ntBASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK5RAP3Q96JB5 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms