Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MTCO3P39-201ENST00000514812 518 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 RNA5SP49-201ENST00000516450 115 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AL109766.1-201ENST00000555080 552 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 KPNA2P3-201ENST00000584190 848 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AL445567.2-201ENST00000618935 498 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC105105.5-201ENST00000622635 1294 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 LINC01109-201ENST00000603837 3081 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 AC009951.1-201ENST00000623674 2614 ntBASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
ECHDC3Q96DC8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 RN7SKP235-201ENST00000410662 305 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 RPL6P29-201ENST00000414863 865 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MFSD13B-201ENST00000420133 1290 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 TPT1P12-201ENST00000448968 492 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 ABCF2P2-201ENST00000450549 296 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 RPL7P22-201ENST00000466005 733 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC010618.1-201ENST00000469924 477 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 UQCRHP4-201ENST00000471686 272 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC104164.2-201ENST00000496953 495 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 TCP11X3P-202ENST00000514289 1254 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AP003730.1-201ENST00000524605 285 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 OR8X1P-201ENST00000534542 869 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC136624.4-201ENST00000573044 370 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC023575.1-201ENST00000580510 358 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MIR6716-201ENST00000613413 80 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC006338.2-201ENST00000616864 791 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MIR6830-201ENST00000636015 70 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC008013.2-202ENST00000637965 364 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 OR52H1-202ENST00000641796 1061 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 AC074029.4-201ENST00000624796 1859 ntBASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ECHDC3Q96DC8 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 DDX18P4-201ENST00000511690 1966 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 SNORA70.2-201ENST00000364506 135 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 SNORD66.1-201ENST00000391230 76 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AL161909.1-201ENST00000397390 712 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 ST13P16-201ENST00000401760 781 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC093084.1-201ENST00000424233 687 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AL158073.1-201ENST00000426848 1104 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC006064.5-201ENST00000541782 248 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC069366.1-201ENST00000583159 838 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 FAM60CP-201ENST00000591086 664 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC090948.2-201ENST00000607363 564 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 AC007620.3-201ENST00000608131 497 ntBASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
ECHDC3Q96DC8 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms