Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AL160175.1-201ENST00000428124 247 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 BX323845.1-201ENST00000432417 179 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 MED6P1-201ENST00000439659 713 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC044797.1-201ENST00000445744 679 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AL139824.2-201ENST00000458731 1095 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 snoU13.1-201ENST00000459157 104 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 FTH1P2-201ENST00000466086 412 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC073358.1-201ENST00000505671 684 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 PRELID3BP5-201ENST00000508612 460 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC118942.1-201ENST00000529674 1035 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AP000916.1-201ENST00000533869 835 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AP001880.2-201ENST00000538233 448 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AL049830.4-201ENST00000555149 351 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 SNORD39.2-201ENST00000579995 76 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 MIR5096-201ENST00000583713 70 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AP001160.4-201ENST00000596971 382 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 MTCO2P22-201ENST00000603246 681 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC124016.2-201ENST00000610058 665 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
TM9SF4Q92544 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 MAPK10-320ENST00000641462 6696 ntBASIC4.54□□□□□ -1.68
TM9SF4Q92544 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM9SF4Q92544 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 RNU5E-10P-201ENST00000363506 118 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 RNU6-468P-201ENST00000384003 109 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM9SF4Q92544 HMGB3P19-201ENST00000403971 560 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL355615.1-201ENST00000406187 641 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 MTCYBP7-201ENST00000419540 1134 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC006065.1-201ENST00000422539 802 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC016831.4-201ENST00000438302 307 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL450263.2-201ENST00000439400 589 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 HMGB1P26-201ENST00000452520 628 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC093166.2-201ENST00000455969 1017 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 RPS5P7-201ENST00000456664 608 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL445433.1-201ENST00000457507 257 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC010326.1-201ENST00000462726 602 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC090686.1-201ENST00000481577 749 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 MRPS33P2-201ENST00000507850 322 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 HPRT1P1-201ENST00000509498 657 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 RN7SKP92-201ENST00000517266 244 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC021483.2-201ENST00000567415 758 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL606834.3-201ENST00000602615 496 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL357094.1-201ENST00000603845 844 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC096553.1-201ENST00000605169 829 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AL049794.2-201ENST00000616301 365 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC093875.1-201ENST00000623688 504 ntBASIC4.53□□□□□ -1.68
TM9SF4Q92544 AC021106.3-201ENST00000623925 531 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms