Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 MIR7703-201ENST00000620784 77 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC015813.6-201ENST00000624409 5808 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 ATE1-AS1-202ENST00000636460 506 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 AC073869.10-201ENST00000642016 354 ntBASIC5.1□□□□□ -1.59
HMGB4Q8WW32 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HMGB4Q8WW32 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AP001029.2-203ENST00000589795 4910 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 SAMMSON-226ENST00000642089 1582 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RN7SKP74-201ENST00000362849 309 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RNU1-32P-201ENST00000363937 159 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RNA5SP223-201ENST00000365174 120 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AF228730.1-201ENST00000397972 663 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC119751.6-201ENST00000416712 186 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 VPS26BP1-201ENST00000417155 755 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AL356320.2-201ENST00000417263 507 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 Z75741.2-201ENST00000417272 1167 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 MTCO2P21-201ENST00000419780 677 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 GAPDHP49-201ENST00000421421 961 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 C4BPAP2-201ENST00000428434 478 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 DNAJC19P7-201ENST00000428811 344 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 BX323845.1-201ENST00000432417 179 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RPL7P11-201ENST00000437586 658 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC092809.1-201ENST00000441469 474 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 YWHAQP9-201ENST00000445891 512 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 BX248409.1-201ENST00000455497 255 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 FTH1P2-201ENST00000466086 412 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RPL23AP44-201ENST00000482216 473 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 MTCYBP35-201ENST00000503630 1137 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC097173.1-201ENST00000505862 819 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC098799.3-201ENST00000506095 438 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RNU6-416P-201ENST00000516265 103 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RNU6-347P-201ENST00000516658 105 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 IGKV2-36-201ENST00000519999 223 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 NIFKP8-201ENST00000560500 874 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC090751.1-201ENST00000566966 267 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 GAS5-AS1-201ENST00000602767 694 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AL020997.3-201ENST00000602843 359 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC023509.5-201ENST00000617434 807 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 LINC02211-204ENST00000642024 1070 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 OR9K1P-202ENST00000641111 3217 ntBASIC5.09□□□□□ -1.59
HMGB4Q8WW32 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.09□□□□□ -1.59
HMGB4Q8WW32 AC083899.1-201ENST00000454465 3819 ntBASIC5.09□□□□□ -1.6
HMGB4Q8WW32 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.09□□□□□ -1.6
HMGB4Q8WW32 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.09□□□□□ -1.6
HMGB4Q8WW32 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.09□□□□□ -1.6
HMGB4Q8WW32 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 MTND4P10-201ENST00000446199 1363 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC005261.4-201ENST00000600047 1385 ntBASIC5.08□□□□□ -1.6
HMGB4Q8WW32 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
HMGB4Q8WW32 AC099654.2-201ENST00000433031 1980 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms