Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SNORA21-201ENST00000362423 132 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RNU6-462P-201ENST00000362659 105 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 Y_RNA.89-201ENST00000363031 102 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SNORD1C-201ENST00000363315 78 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RN7SKP250-201ENST00000363924 321 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 MT-TD-201ENST00000387419 68 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 MIR320B1-201ENST00000390209 79 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL034374.1-201ENST00000406329 351 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL035422.1-201ENST00000414193 397 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 C1DP2-201ENST00000418167 426 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RPL21P111-201ENST00000418453 477 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 THEM7P-201ENST00000419556 672 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RPL12P12-201ENST00000424633 501 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 ZYG11AP1-201ENST00000430329 837 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RPL37P21-201ENST00000435890 276 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL451074.3-201ENST00000437709 472 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 UBE2V1P5-201ENST00000440070 405 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RPL7P59-201ENST00000447700 943 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC239798.3-201ENST00000454459 408 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 ACA64.4-201ENST00000459070 127 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 HMGN1P10-201ENST00000474557 553 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RBM43P1-201ENST00000476891 1081 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SCARNA15.1-201ENST00000516384 125 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 MRPS21P8-201ENST00000569196 235 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC137800.2-201ENST00000574375 120 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SNORD39.2-201ENST00000579995 76 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC119403.2-201ENST00000590960 598 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC091488.1-201ENST00000604239 660 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC010200.2-201ENST00000605098 235 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC055764.2-201ENST00000610089 670 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 uc_338.29-201ENST00000615099 168 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC104010.1-201ENST00000616889 150 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC108479.2-201ENST00000617314 601 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC117529.2-201ENST00000512159 2068 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 AC027575.3-201ENST00000583058 2747 ntBASIC5.66□□□□□ -1.5
NUP43Q8NFH3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.66□□□□□ -1.5
NUP43Q8NFH3 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 OR10R3P-201ENST00000361688 942 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 RNA5SP110-201ENST00000362638 115 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 RNU6-492P-201ENST00000363035 104 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 RN7SKP171-201ENST00000364417 303 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 Y_RNA.295-201ENST00000364918 102 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 GNG5P2-201ENST00000372054 207 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 TMSB4XP8-201ENST00000402089 135 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 TMSB4XP6-201ENST00000415187 135 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AL953862.1-201ENST00000423016 168 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 TMSB4XP1-201ENST00000424567 135 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC130360.1-201ENST00000425489 1117 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC108479.1-201ENST00000431142 427 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 PGBD4P3-201ENST00000440731 581 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 AC016027.4-201ENST00000450866 277 ntBASIC5.65□□□□□ -1.5
NUP43Q8NFH3 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.65□□□□□ -1.5
NUP43Q8NFH3 RPS27P23-201ENST00000487608 251 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms