Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 MIR4715-201ENST00000584117 79 ntBASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 MIR4443-201ENST00000585052 53 ntBASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TTC9CQ8N5M4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC083899.2-201ENST00000423285 1376 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 EIF2AP4-201ENST00000424793 1781 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RNA5SP239-201ENST00000410218 129 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC245028.1-201ENST00000423259 256 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AL158073.1-201ENST00000426848 1104 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 MAPRE1P3-201ENST00000435438 796 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 PPIAP17-201ENST00000438507 471 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC099063.2-201ENST00000446360 662 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 HMGB1P16-201ENST00000447155 540 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 EIF4A1P11-201ENST00000451239 222 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 NDUFA12P1-201ENST00000455914 406 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 snoU13.1-201ENST00000459157 104 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RPS20P4-201ENST00000461659 355 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RPL21P71-201ENST00000465598 459 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC104164.2-201ENST00000496953 495 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC139783.2-201ENST00000504847 1145 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RNA5SP73-201ENST00000516744 108 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC091515.1-201ENST00000548110 679 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 CYP4A43P-201ENST00000568156 121 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 HNRNPCP4-201ENST00000571636 900 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC007448.1-201ENST00000582714 234 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC020914.4-201ENST00000597690 277 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RN7SL722P-201ENST00000617780 284 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 RN7SL565P-201ENST00000618246 284 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AC007546.1-201ENST00000619452 559 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 NRK-204ENST00000540278 1687 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
TTC9CQ8N5M4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AL607077.1-201ENST00000401718 499 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 ELOCP19-201ENST00000411919 318 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 P2RY10P2-201ENST00000416730 913 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 SEC63P1-201ENST00000425785 1258 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AL157831.1-201ENST00000426134 473 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 RPS29P17-201ENST00000430795 166 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AL353597.2-202ENST00000434901 373 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AL645939.1-201ENST00000453429 797 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 SBDSP1-204ENST00000453858 737 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC108145.1-201ENST00000503770 153 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 BNIP3P41-201ENST00000503774 571 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC010476.1-201ENST00000519111 851 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 VN1R79P-201ENST00000593540 513 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 MIR7702-201ENST00000621931 59 ntBASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC3.37□□□□□ -1.87
TTC9CQ8N5M4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms