Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AL138820.1-201ENST00000617901 5305 ntBASIC5.37□□□□□ -1.55
SLC44A3Q8N4M1 SDAD1P1-202ENST00000524156 2051 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 BCORP1-203ENST00000513194 5093 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AL022311.1-201ENST00000623726 19416 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RNU6-553P-201ENST00000364047 96 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RNA5SP90-201ENST00000364801 99 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RN7SKP114-201ENST00000410327 279 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC119751.6-201ENST00000416712 186 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 Z75741.2-201ENST00000417272 1167 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 BTF3P9-201ENST00000418784 283 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC023128.2-201ENST00000420880 1223 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RPL7P53-201ENST00000421245 739 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 GTF2IP2-201ENST00000424290 697 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RAC1P8-201ENST00000427086 527 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC068287.1-201ENST00000430283 295 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC073264.2-201ENST00000448886 166 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 HMGB1P5-202ENST00000451497 985 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC063943.1-201ENST00000465434 453 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RPL23AP72-201ENST00000492447 435 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 OR8Q1P-201ENST00000526467 655 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AGGF1P4-201ENST00000568249 801 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC022069.1-201ENST00000582910 658 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 SUMO2P14-201ENST00000604488 293 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 LSM1P2-201ENST00000604911 322 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AL162574.1-201ENST00000615702 950 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC010608.2-201ENST00000624830 470 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 AC004158.1-201ENST00000564508 4319 ntBASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC44A3Q8N4M1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC005832.2-201ENST00000538921 1430 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AP000526.1-201ENST00000603308 1388 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 SNORD65C-201ENST00000390962 71 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AF274854.1-201ENST00000413236 615 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 RAD23BP2-201ENST00000416003 1207 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 BX276092.6-201ENST00000430476 250 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 MOB1AP1-201ENST00000430903 535 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL353898.1-201ENST00000444055 238 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL161722.1-201ENST00000446972 1032 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AL050341.1-201ENST00000447743 313 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 RPL12P26-201ENST00000452430 487 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC009963.2-201ENST00000453431 138 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 BX276092.8-201ENST00000455722 250 ntBASIC5.35□□□□□ -1.55
SLC44A3Q8N4M1 AC079168.1-201ENST00000458741 345 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms