Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00643Q86TS7 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00643Q86TS7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00643Q86TS7 AL139811.1-201ENST00000424779 2299 ntBASIC2.48□□□□□ -2.01
LINC00643Q86TS7 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LINC00643Q86TS7 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LINC00643Q86TS7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 YWHAZP6-201ENST00000399764 738 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 GABARAPL3-201ENST00000412799 354 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 SDCBPP3-201ENST00000419629 891 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MTND2P16-201ENST00000419987 799 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MOB1AP1-201ENST00000430903 535 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RPL23AP69-201ENST00000431134 458 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 MRPL50P1-201ENST00000431951 384 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 PNKDP1-201ENST00000435914 430 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 snoU13.20-201ENST00000459180 104 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RPS20P23-201ENST00000461683 354 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RPL35AP15-201ENST00000468042 339 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RPL7P5-201ENST00000471472 736 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RN7SL826P-201ENST00000479724 288 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RN7SL502P-201ENST00000481857 290 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 HMGN2P25-201ENST00000486956 268 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RN7SL283P-201ENST00000489055 303 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RN7SL362P-201ENST00000494228 267 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC012170.1-201ENST00000495139 359 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 SNX5P1-201ENST00000505757 1041 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC010409.2-201ENST00000505780 478 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 ATP1B1P1-201ENST00000509767 915 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC098679.3-203ENST00000514881 919 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 RPL12P22-201ENST00000519073 490 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 SUMO2P20-201ENST00000520803 283 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC010198.2-201ENST00000550612 259 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 STARD6-204ENST00000584040 660 ntTSL 3 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AP000843.1-201ENST00000624880 701 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 LINC01808-202ENST00000641680 1116 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 AL672296.1-201ENST00000427780 2158 ntBASIC2.47□□□□□ -2.01
LINC00643Q86TS7 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
LINC00643Q86TS7 NCLP2-201ENST00000416078 1462 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RNA5SP175-201ENST00000364275 119 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC140479.3-201ENST00000418944 1126 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 OR2B8P-201ENST00000432841 938 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC097523.2-201ENST00000435551 652 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RPS10P14-201ENST00000440748 502 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RPL7P45-201ENST00000455851 743 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC089999.1-201ENST00000460336 374 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC091179.1-201ENST00000461606 579 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC009127.1-201ENST00000467090 155 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC097484.1-201ENST00000471148 389 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RPL23AP73-201ENST00000492507 471 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC097460.2-201ENST00000511857 741 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RNA5SP385-201ENST00000515947 110 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC024405.1-201ENST00000532521 1042 ntBASIC2.46□□□□□ -2.02
LINC00643Q86TS7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC2.46□□□□□ -2.02
LINC00643Q86TS7 AC005951.1-201ENST00000576706 485 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms