Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ZNF37BP-203ENST00000452306 1352 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ATG4DQ86TL0 CYP1D1P-201ENST00000416662 1433 ntBASIC5.74□□□□□ -1.49
ATG4DQ86TL0 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 FARSBP1-201ENST00000435808 1778 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 MIR433-201ENST00000384837 93 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 Y_RNA.579-201ENST00000390939 94 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 HMGA1P8-201ENST00000414130 321 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 RPS17P17-201ENST00000419392 409 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC006065.1-201ENST00000422539 802 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 BX890604.2-201ENST00000427883 474 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 DYNLL1P7-201ENST00000429273 258 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC009961.2-201ENST00000435771 251 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 HMGB3P12-201ENST00000438745 556 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL138899.2-201ENST00000439139 499 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 RPL7P12-201ENST00000446719 750 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL590365.1-201ENST00000450788 243 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC073594.1-201ENST00000462065 364 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AOX3P-204ENST00000491025 2107 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 OR51A1P-201ENST00000511110 946 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC017037.2-201ENST00000513850 890 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 COX6CP5-201ENST00000527162 228 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 PRELID3BP8-201ENST00000604148 295 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC006924.1-201ENST00000610750 559 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC104010.1-201ENST00000616889 150 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC009268.2-201ENST00000621925 457 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 AC100810.6-201ENST00000638068 285 ntBASIC5.73□□□□□ -1.49
ATG4DQ86TL0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ATG4DQ86TL0 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RN7SKP187-201ENST00000365536 330 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RNU6-505P-201ENST00000384427 107 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 U8.14-201ENST00000390843 143 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AL603908.1-201ENST00000406098 201 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RNU2-39P-201ENST00000410604 198 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RNU2-62P-201ENST00000410868 191 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 EIF1P3-201ENST00000423841 334 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RPL35AP12-201ENST00000425362 338 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AL358176.2-201ENST00000425769 204 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC236972.2-201ENST00000434979 310 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 RPL7P54-201ENST00000438336 674 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC023274.2-201ENST00000445264 521 ntBASIC5.72□□□□□ -1.49
ATG4DQ86TL0 AC090589.1-201ENST00000473109 362 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms