Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
VPS13CQ709C8 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.89
VPS13CQ709C8 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
VPS13CQ709C8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
VPS13CQ709C8 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 SNORA60-201ENST00000362396 134 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC006511.1-201ENST00000470614 315 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC010486.1-201ENST00000511793 424 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC019278.1-201ENST00000623516 479 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AF001550.2-201ENST00000636643 217 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 BIVM-ERCC5-201ENST00000602836 5143 ntAPPRIS P5 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AL161631.1-201ENST00000417933 486 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC068870.3-201ENST00000625077 2536 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AC023632.6-201ENST00000624338 2177 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 VN1R32P-201ENST00000452234 905 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 RPL21P13-201ENST00000488305 481 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 RNU7-143P-201ENST00000516781 65 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13CQ709C8 AL033523.1-201ENST00000605153 153 ntBASIC3.21□□□□□ -1.9
VPS13CQ709C8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AP004289.2-201ENST00000444413 1457 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AL133162.1-201ENST00000463228 453 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 PHBP17-201ENST00000528576 541 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 CDY11P-201ENST00000447168 1651 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC092111.2-201ENST00000611627 1414 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC079777.1-201ENST00000623836 1953 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 MTND2P15-201ENST00000418575 892 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC069304.1-201ENST00000491593 704 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AC013412.1-201ENST00000610687 192 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS13CQ709C8 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13CQ709C8 SNORA48.5-201ENST00000391143 135 ntBASIC3.2□□□□□ -1.9
VPS13CQ709C8 MIR1179-201ENST00000408703 91 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms