Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AL049634.1-201ENST00000453770 1720 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 FARSBP1-201ENST00000435808 1778 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RNU6-1309P-201ENST00000363305 108 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 SNORD42.2-201ENST00000365570 69 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.605-201ENST00000410577 105 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RNU2-42P-201ENST00000410697 113 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AL353678.1-201ENST00000422735 741 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 VDAC1P2-201ENST00000423609 850 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 OR2B7P-201ENST00000429302 934 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.631-201ENST00000459607 101 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC006539.1-201ENST00000481419 501 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC114981.1-201ENST00000503897 678 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RNU7-30P-201ENST00000516835 62 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 RAD21-204ENST00000518055 896 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 GTF2IP8-201ENST00000560687 584 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC136618.2-201ENST00000575091 400 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 KPNA2P3-201ENST00000584190 848 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC009977.1-201ENST00000586015 570 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 MTCO2P22-201ENST00000603246 681 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC112191.3-201ENST00000604371 277 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC097467.4-201ENST00000605504 141 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC018695.5-201ENST00000605872 315 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC090948.2-201ENST00000607363 564 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AL355472.4-201ENST00000610233 626 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 uc_338.5-201ENST00000611839 155 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 STMN1P1-201ENST00000617809 440 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC011447.7-201ENST00000624228 1590 ntBASIC7.75□□□□□ -1.17
RC3H1Q5TC82 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.75□□□□□ -1.17
RC3H1Q5TC82 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 HMGB1P5-201ENST00000255320 642 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RNA5SP46-201ENST00000362370 120 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RN7SKP162-201ENST00000363605 345 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.157-201ENST00000363638 102 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC016739.1-201ENST00000405359 345 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RN7SKP279-201ENST00000411383 298 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC004690.1-201ENST00000418216 328 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RPS26P13-201ENST00000419030 330 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 OR5W1P-201ENST00000423705 938 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 GTF2IP20-201ENST00000431663 360 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC073909.1-201ENST00000447112 999 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AL157827.1-201ENST00000447622 132 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC016027.4-201ENST00000450866 277 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 MTND1P9-201ENST00000453775 944 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 RN7SL799P-201ENST00000475891 298 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 ACTR3P3-201ENST00000480448 893 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 HMGN2P25-201ENST00000486956 268 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC007182.2-201ENST00000489251 402 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC103851.1-201ENST00000506833 274 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 Y_RNA.711-201ENST00000516993 102 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 IGJP1-201ENST00000522682 475 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 COX6CP5-201ENST00000527162 228 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 DERA-209ENST00000532964 854 ntTSL 5 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC018630.1-201ENST00000541376 925 ntBASIC7.74□□□□□ -1.17
RC3H1Q5TC82 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms