Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 MYOCD-201ENST00000343344 2817 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 RNY4P16-201ENST00000364768 94 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 MRPL35P1-201ENST00000404272 572 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 MTATP6P16-201ENST00000434543 526 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 KF459542.1-201ENST00000450908 553 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 RPL10P7-201ENST00000495649 625 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 OR51A1P-201ENST00000511110 946 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 IGLV1-62-201ENST00000518003 441 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 RBMS2P1-201ENST00000525031 1226 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 CYCSP28-201ENST00000534284 321 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC023908.2-201ENST00000558616 318 ntTSL 3 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 MIR5186-201ENST00000577504 120 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC138207.8-204ENST00000579588 527 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 RN7SL178P-201ENST00000582930 304 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC092960.1-201ENST00000604762 351 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC122710.3-201ENST00000606566 541 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 BX284668.6-201ENST00000606899 438 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 AC097381.3-201ENST00000608962 462 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 LRRC2-AS1-201ENST00000599511 2291 ntBASIC7.78□□□□□ -1.16
VARS2Q5ST30 CNOT7-201ENST00000361272 6913 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 HIST1H2BN-203ENST00000606613 4137 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 DOCK8-204ENST00000432829 7452 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
VARS2Q5ST30 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
VARS2Q5ST30 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
VARS2Q5ST30 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 MMP10-201ENST00000279441 1758 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 ABRAXAS2-201ENST00000298492 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 RNU6-82P-201ENST00000363970 107 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 RNU6-441P-201ENST00000384545 106 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 FAUP2-201ENST00000394301 401 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL603910.2-201ENST00000407268 136 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL593856.1-201ENST00000419949 805 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC137499.1-201ENST00000427602 88 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 RPL34P27-201ENST00000428810 349 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC073900.1-201ENST00000429766 776 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC093716.1-201ENST00000435923 377 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL138899.2-201ENST00000439139 499 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 RN7SL775P-201ENST00000498361 336 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 NACAP6-201ENST00000509572 622 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 RNA5SP384-201ENST00000516615 116 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 RNU6-861P-201ENST00000516745 106 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC131935.1-201ENST00000524621 333 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 SARNP-203ENST00000552080 726 ntTSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 RPSAP66-201ENST00000592196 606 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL627230.1-201ENST00000613077 211 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 OR7E161P-202ENST00000641994 1033 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC073869.10-201ENST00000642016 354 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 AC096921.2-201ENST00000561507 1916 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 AL391684.1-202ENST00000641293 1636 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
VARS2Q5ST30 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 SPATA2P1-201ENST00000431223 2055 ntBASIC7.77□□□□□ -1.17
VARS2Q5ST30 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.77□□□□□ -1.17
VARS2Q5ST30 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms